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Series GSE157038 Query DataSets for GSE157038
Status Public on Nov 14, 2022
Title Study of bone marrow Nestin+ mesenchymal stromal cells in control and leukemic mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary NRAS-G12D+ mice show reduced numbers of mesenchymal stromal cells together with increased apoptotic rates as compared to healthy controls.
 
Overall design Male Nes-gfp mice were lethally irradiated and transplanted with bone marrow cells from previously pI-pC induced control (Mx1-Cre-negative NRAS-G12D-positive) or leukemic (Mx1-Cre-positive NRAS-G12D-positive) mice, at the age of 28 weeks. Bone marrow Nes-gfp-positive mesenchymal stromal cells were FACS-sorted 4 weeks after the transplant, and total RNA was isolated and used for RNA sequencing.
 
Contributor(s) Bernal A, Utnes P, Paulssen RH, Arranz L
Citation(s) 36596811
Submission date Aug 28, 2020
Last update date Feb 13, 2023
Contact name Lorena Arranz
E-mail(s) lorena.arranz@uit.no
Phone +47 77 62 08 41
Organization name UiT The Arctic University of Norway
Department Department of Medical Biology
Lab Stem Cells, Ageing and Cancer Research Group
Street address Hansine Hansens veg 74
City Tromsø
ZIP/Postal code 9019
Country Norway
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (4)
GSM4751269 Control mouse 1 [NRAS_WT_rep1]
GSM4751270 Control mouse 2 [NRAS_WT_rep2]
GSM4751271 NRAS-G12D+ mouse 1 [NRAS_TG_rep1]
Relations
BioProject PRJNA659931
SRA SRP279176

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157038_NRas_GFP_DGE_normCounts.txt.gz 592.1 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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