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Series GSE157053 Query DataSets for GSE157053
Status Public on Aug 29, 2020
Title Profiling of histone modifications in bovine embryonic stem cells
Organism Bos taurus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Profiling of H3K27me3 and H3K4me3 in bovine embryonic stem cells using Cut&Run.
 
Overall design Cut&Run libraries were prepared from bovine embryonic stem cells. Two histone modifications were profiled (H3K27me3 and H3K4me3) and for each mark, two replicate libraries were prepared.
 
Contributor(s) Halstead MM, Zhou C, Navarro M, Ross PJ
Citation(s) 34040070
Submission date Aug 28, 2020
Last update date Jun 03, 2021
Contact name Michelle M Halstead
E-mail(s) mhalstead226@gmail.com
Organization name University of California, Davis
Department Animal Science
Lab Ross Lab
Street address Meyer Hall, 450 Bioletti Way
City Davis
State/province CA
ZIP/Postal code 95616
Country USA
 
Platforms (1)
GPL23055 Illumina NextSeq 500 (Bos taurus)
Samples (4)
GSM4751744 bESC_r1_CutRun_H3K4me3
GSM4751745 bESC_r2_CutRun_H3K4me3
GSM4751746 bESC_r1_CutRun_H3K27me3
Relations
BioProject PRJNA659993
SRA SRP279202

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157053_RAW.tar 480.3 Mb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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