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| Status |
Public on Jul 31, 2010 |
| Title |
Affymetrix 6.0 study of sporadic motor neuron disease patients and controls. |
| Organism |
Homo sapiens |
| Experiment type |
SNP genotyping by SNP array
Genome variation profiling by SNP array
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| Summary |
This data was divided into three experiment sets: 1. A somatic study of sporadic motor neuron disease (SMND) brain samples that were compared to the blood from the same individual, normal control brains and disease control brans (Parkinson Disease patients); 2. A twin study comparing blood and other tissue samples from twins that were discordant for MND, concordant for MND and control twins and 3. A trio study of blood samples MND patients compared to their unaffected parents.
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| Overall design |
Study 1: 36 sporadic motor neuron disease brain (lateral frontal cortex, Brodmann area 46), 34 matched sporadic motor neuron disease blood, 26 control brain (lateral frontal cortex, Brodmann area 46), 9 Parkinson Disease brain (disease controls, lateral frontal cortex, Brodmann area 46). Study 2 and study 3: 52 twin or trio blood, 4 twin hair, 1 twin sperm. 2 replicate twin blood and 1 replicate trio blood repeated at a different time. External control blood from Coriell GM15510 and GM10851.
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| Contributor(s) |
Pamphlett R, Morahan J |
| Citation(s) |
21741244 |
| Submission date |
Apr 25, 2009 |
| Last update date |
Apr 09, 2020 |
| Contact name |
Roger Pamphlett |
| Organization name |
University of Sydney
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| Street address |
Blackburn Bld
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| City |
University of Sydney |
| ZIP/Postal code |
2006 |
| Country |
Australia |
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| Platforms (1) |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
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| Samples (164)
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| Relations |
| BioProject |
PRJNA116749 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE15826_RAW.tar |
6.8 Gb |
(http)(custom) |
TAR (of CEL, CHP) |
| Processed data included within Sample table |
| Processed data provided as supplementary file |
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