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Series GSE159135 Query DataSets for GSE159135
Status Public on Jan 29, 2021
Title Feeding differentially regulates clocks and rhythmicity of peripheral tissues through the liver-clock
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The mammalian circadian system consists of a central clock in the brain that synchronizes clocks in peripheral tissues. While the hierarchy between the central and peripheral clocks is well established, peripheral clocks are largely viewed as a group and little is known regarding their specificity and functional organization. We employed feeding paradigms in conjunction with liver-specific clock-deficient murine model to map disparities and potential interactions between peripheral clocks. We found that peripheral clocks largely differ in their response to feeding-time. In view of its prominent role in nutrient processing, we hypothesized that the liver-clock instigate the response of peripheral clocks to feeding. Although the liver-clock did not affect the rhythmicity of clocks in other peripheral tissues, it strongly modulated their transcriptional rhythmicity upon daytime feeding. Overall, our findings suggest a role for the liver-clock in buffering feeding-related signals that affect rhythmicity of other peripheral tissues upon nutrient challenge, irrespective of their clocks.
 
Overall design Mice of either Alb-Cre+ (control) or Bmal1 fl/fl Alb-Cre+ (aka BLKO), where fed either Ad Libitum (AL) or only during the light-phase (Daytime-feeding, DF)
 
Contributor(s) Manella G, Asher G, Golik M, Sabbath E
Citation(s) 34059820
Submission date Oct 06, 2020
Last update date Jun 18, 2021
Contact name Gal Manella
Organization name Weizmann Institute of Science
Street address 234 Herzel St.
City Rehovot
State/province Israel
ZIP/Postal code 7610001
Country Israel
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (288)
GSM4819933 Liver_276_albcre_AL_0A
GSM4819934 Liver_276_albcre_AL_0B
GSM4819935 Liver_276_albcre_AL_2A
Relations
BioProject PRJNA667743
SRA SRP286568

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Supplementary file Size Download File type/resource
GSE159135_Liver_AlbCre_reads.xlsx 10.0 Mb (ftp)(http) XLSX
GSE159135_Liver_BLKO_reads.xlsx 10.4 Mb (ftp)(http) XLSX
GSE159135_Lung_AlbCre_reads.xlsx 12.5 Mb (ftp)(http) XLSX
GSE159135_Lung_BLKO_reads.xlsx 12.8 Mb (ftp)(http) XLSX
GSE159135_WAT_AlbCre_reads.xlsx 12.4 Mb (ftp)(http) XLSX
GSE159135_WAT_BLKO_reads.xlsx 12.0 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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