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Series GSE16008 Query DataSets for GSE16008
Status Public on Mar 14, 2011
Title Gene expression from bronchial and nasal epithelial cell samples of healthy current and never smokers.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary mRNA expression was assayed from bronchial epithelial cells collected via bronchoscopy and nasal epithelial cells collected by brushing the inferior turbinate from healthy current and never smoker volunteers in order to determine the relationship between smoking-related gene expression changes in bronchial and nasal epithelium within the same individual.
 
Overall design Bronchial epithelial cells were collected from current and never smokers via bronchoscopy, and nasal epithelial cells were collected by brushing the inferior turbinate during the same clinic visit. 1ug of RNA was isolated and hybridized to Affymetrix Human Exon 1.0 ST microarrays to obtain mRNA expression. The genome build upon which transcript assignments are based is hg18 (HuEx-1_0-st-v2.na27.hg18.transcript.csv).
 
Contributor(s) Zhang X, Spira A
Citation(s) 19952278
Submission date May 07, 2009
Last update date Feb 18, 2019
Contact name Xiaoling Zhang
E-mail(s) aspira@bu.edu
Organization name Boston University
Department Pulmonary
Street address 715 Albany Street
City Bosotn
State/province MA
ZIP/Postal code 02118
Country USA
 
Platforms (1)
GPL5175 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version]
Samples (73)
GSM400579 Patient 459 Current Smoker (B459C-1)
GSM400580 Patient 462 Current Smoker (B462C)
GSM400581 Patient 524 Current Smoker (B524C)
Relations
BioProject PRJNA115431

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE16008_RAW.tar 1.5 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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