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Series GSE162141 Query DataSets for GSE162141
Status Public on Dec 31, 2021
Title DNMT1 reads heterochromatic H4K20me3 to reinforce DNA methylation of transposons
Organism Mus musculus
Experiment type Other
Summary DNA methylation and trimethylated histone H4K20 (H4K20me3) constitute two important epigenetic mechanisms that frequently cooperate in silencing repetitive elements of the mammalian genome. However, it remains elusive how these two modifications crosstalk. Here, we report the specific readout of heterochromatin marks H4K20me3 by the first bromo-adjacent-homology (BAH1) domain of maintenance DNA methyltransferase DNMT1. Engagement of BAH1-H4K20me3 ensures heterochromatin targeting of DNMT1, and cooperates with the previously reported readout of H3K9me3/H3 ubiquitination by the RFTS domain to allosterically stimulate DNMT1’s activity at both global and focal levels. Interplay between RFTS and BAH1 domains profoundly impacts the maintenance of DNA methylation and genomic resistance to radiation damage. Together, our study provides a heterochromatin-regulated model for DNMT1 in which multivalent recognition of repressive histone modifications by DNMT1 directly influence the cellular landscape of DNA methylation and genomic stability.
 
Overall design H4K20me3 CUT&RUN was performed in Dnmt1 KO ES cell overexpressed with wild type or W796A DNMT1.
 
Contributor(s) Wang G
Citation(s) 32675241
Submission date Nov 25, 2020
Last update date Apr 04, 2022
Contact name Greg Wang
E-mail(s) greg_wang@med.unc.edu, greg.wang@duke.edu
Organization name Duke University School of Medicine, and Department of Biochemistry and Biophysics, UNC at Chapel Hill (adjunct)
Department Duke Department of Pharmacology and Cancer Biology and Duke Cancer Institute
Street address 3 Genome Court
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (2)
GSM4942857 DNMT1_WT_H4K20me3
GSM4942858 DNMT1_W796A_H4K20me3
Relations
BioProject PRJNA680755
SRA SRP294138

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Supplementary file Size Download File type/resource
GSE162141_RAW.tar 194.6 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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