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Series GSE162589 Query DataSets for GSE162589
Status Public on Dec 04, 2020
Title Conserved Gsx2/Ind homeodomain monomer versus homodimer DNA binding defines regulatory outcomes in the fly and mouse
Organism Mus musculus
Experiment type Other
Summary Identification of Gsx2 genomic binding patterns from E12.5 mouse lateral ganglionic eminence (LGEs).
 
Overall design CUT&RUN analysis was performed to identify Gsx2 genomic binding patterns from dissected E12.5 mouse lateral ganglionic eminence (LGEs) using an endogenously tagged Gsx2-2xFLAG mouse line.
 
Contributor(s) Gebelein B, Campbell K, Salomone J, Qin S, Lim H
Citation(s) 33334823
Submission date Dec 03, 2020
Last update date Mar 05, 2021
Contact name Hee-Woong Lim
Organization name Cincinnati Children's Hospital Medical Center
Department Division of Biomedical Informatics
Street address 3333 Burnet Ave. MLC 7024
City Cincinnati
State/province Ohio
ZIP/Postal code 45229
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (4)
GSM4955001 LGE E12.5 IgG replicate 1
GSM4955002 LGE E12.5 IgG replicate 2
GSM4955003 LGE E12.5 Gsx2/Flag replicate 1
Relations
BioProject PRJNA682340
SRA SRP295637

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162589_RAW.tar 266.4 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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