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Series GSE162710 Query DataSets for GSE162710
Status Public on May 15, 2024
Title Genome-wide characterization of effects of LINC01021 on p53-regulated gene expression in CRC cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We studied the effect of CRISPR/Cas9-mediated deletion of LINC01021 on genome-wide RNA expression changes after ectopic activation of p53 in CRC cells by RNA-Seq analyses
 
Overall design RNA expression profiles with and without ectopic activation of p53 in colorectal cancer cells with and without deletion of LINC01021
 
Contributor(s) Kaller M, Hermeking H
Citation(s) 38730591
Submission date Dec 04, 2020
Last update date May 16, 2024
Contact name Markus Kaller
E-mail(s) markus.kaller@med.uni-muenchen.de
Phone 0049-89-2180-73732
Organization name Ludwig-Maximilians-University Munich
Department Institute of Pathology
Lab Experimental and Molecular Pathology
Street address Thalkirchner Strasse 36
City Munich
ZIP/Postal code 80337
Country Germany
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (12)
GSM4957736 wt1 -DOX
GSM4957737 wt1 +DOX
GSM4957738 wt2 -DOX
Relations
BioProject PRJNA682642
SRA SRP296004

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162710_RAW.tar 21.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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