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Series GSE163534 Query DataSets for GSE163534
Status Public on Dec 19, 2021
Title Small non-coding RNA organ expression atlas
Organisms Homo sapiens; Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We sequenced 188 tissue samples comprising 35 organ types retrieved from six humans. To demonstrate evolutionary conservation we sequenced in addition 58 samples from 6 tissues of mice.
 
Overall design sncRNA-seq of 188 human tissue samples and 58 mouse tissue samples.
 
Contributor(s) Fehlmann T, Ludwig N, Keller A, Gröger L
Citation(s) 34570238
Submission date Dec 18, 2020
Last update date Aug 02, 2022
Contact name Tobias Fehlmann
Organization name Saarland University
Street address Campus E2 1
City Saarbrücken
ZIP/Postal code 66123
Country Germany
 
Platforms (2)
GPL23227 BGISEQ-500 (Homo sapiens)
GPL28457 DNBSEQ-G400 (Mus musculus)
Samples (246)
GSM4981059 sncRNA organ atlas, Homo sapiens, adipocyte_2
GSM4981060 sncRNA organ atlas, Homo sapiens, thyroid_5
GSM4981061 sncRNA organ atlas, Homo sapiens, artery_2
Relations
BioProject PRJNA686442
SRA SRP298510

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163534_sncRNA_counts_human_rpmm.txt.gz 53.6 Mb (ftp)(http) TXT
GSE163534_sncRNA_counts_mouse_rpmm.txt.gz 2.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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