NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE164942 Query DataSets for GSE164942
Status Public on May 01, 2021
Title Genetic effects on liver chromatin accessibility identify disease regulatory variants
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Genome variation profiling by SNP array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 34038741
Submission date Jan 15, 2021
Last update date Jun 22, 2021
Contact name Karen L Mohlke
E-mail(s) mohlke@med.unc.edu
Organization name University of North Carolina at Chapel Hill
Department Genetics
Street address 120 Mason Farm Road
City Chapel Hill
State/province NC
ZIP/Postal code 27599-7264
Country USA
 
Platforms (3)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
GPL25201 InfiniumOmni2-5Exome-8v1-3_A1
Samples (60)
GSM5021282 liverTissue_ATAC-seq_sample365B
GSM5021283 liverTissue_ATAC-seq_sample469
GSM5021284 liverTissue_ATAC-seq_sample786
This SuperSeries is composed of the following SubSeries:
GSE164870 Genetic effects on liver chromatin accessibility identify disease regulatory variants [ATAC-seq]
GSE164876 Genetic effects on liver chromatin accessibility identify disease regulatory variants [RNA-seq]
GSE164938 Genetic effects on liver chromatin accessibility identify disease regulatory variants [genotypes]
Relations
BioProject PRJNA692488

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164942_RAW.tar 26.5 Gb (http)(custom) TAR (of BW, IDAT, NARROWPEAK)
SRA Run SelectorHelp
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap