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Series GSE165459 Query DataSets for GSE165459
Status Public on Jan 26, 2021
Title scRNAseq of MMTV-Neu lung cancer cells in early and late stage
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Cancer cells can disseminate from early-evolved primary lesions. It is thought that a state of early disseminated cancer cell (early DCC) dormancy would precede genetic maturation of DCCs and metastasis initiation. Here we reveal at single cell resolution a previously unrecognized role of mesenchymal- and pluripotency-like programs in coordinating early cancer cell spread and a long-lived dormancy program in early DCCs. We identify in early lesions and early DCCs, the transcription factor ZFP281 as an inducer of mesenchymal- and primed pluripotency-like programs, which is absent in advanced primary tumors and overt metastasis. ZFP281 not only controls the early spread of cancer cells but also locks early DCCs in a prolonged dormancy state by preventing the acquisition of an epithelial-like proliferative program. Thus, ZFP281-driven dormancy of early DCCs may be a rate-limiting step in metastatic progression functioning as a first barrier that DCCs must overcome to then undergo genetic maturation.
This data set aims to characterize MMTV-Neu early and late lung disseminated cancer cells (DCCs).
 
Overall design RNA profile of MMTV-Neu early and late lung disseminated cancer cells (DCCs)
Web link https://www.researchsquare.com/article/rs-145308/v1
 
Contributor(s) Kenigsberg E, Nobre AR
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Submission date Jan 25, 2021
Last update date May 05, 2021
Contact name Julio Aguirre-Ghiso
E-mail(s) julio.aguirre-ghiso@mssm.edu
Organization name Icahn School of Medicine at Mount Sinai
Street address 1468 Madison Avenue, A24-64e
City New York
State/province NY
ZIP/Postal code 10029
Country USA
 
Platforms (1)
GPL21626 NextSeq 550 (Mus musculus)
Samples (3)
GSM5034126 scRNAseq Non-cancer lung cells
GSM5034127 scRNAseq Early Lung (eL) DCCs
GSM5034128 scRNAseq Late Lung (LL) DCCs
Relations
BioProject PRJNA694650
SRA SRP303164

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Supplementary file Size Download File type/resource
GSE165459_RAW.tar 202.4 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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