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Series GSE165902 Query DataSets for GSE165902
Status Public on Mar 01, 2022
Title Transcriptome analysis of JAK2V617F HSPC and endogenous HSPC from irradiated and non-irradiated legs of recipient mice transplanted with JAK2V617F hematopoietic cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary using transplantation of transgenic knock-in JAK2V617F hematopoietic cells into a single irradiated leg, we show development of Polycythemia Vera (PV) from a single anatomical site in immuno-competent mice. Mutant cells colonizing the non-irradiated leg efficiently induce PV. We compared transcriptomic profiles of sorted JAK2V617F HSPC and their reciprocal endogenous WT HSPC in the non-irradiated and irradiated legs from recipient mice transplanted with JAK2V617F hematopoietic cells.
 
Overall design we assesed the differentially expressed genes between endogenous WT and JAK2V617F sorted HSPC from the non-irradiated leg in order to find new potential therapeutic target for suppression of PV syndrome in this pre-clinical model through specific targeting of JAK2V617F cells.
 
Contributor(s) Lewandowski D, Murakami S
Citation(s) 35290450
Submission date Feb 01, 2021
Last update date Jun 13, 2022
Contact name Daniel LEWANDOWSKI
E-mail(s) daniel.lewandowski@cea.fr
Phone +33 (0)1 46 54 86 04
Organization name CEA
Department IBFJ/iRCM
Lab LRTS
Street address 18 route du Panorama
City Fontenay aux Roses
State/province Ile-de-France
ZIP/Postal code 92265
Country France
 
Platforms (1)
GPL23038 [Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (11)
GSM5057673 HSPC_JAK2V617F_Irradiated_leg_1
GSM5057674 HSPC_endogenous_WT_Irradiated_leg_1
GSM5057675 HSPC_JAK2V617F_non_irradiated_leg_1
Relations
BioProject PRJNA698571

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165902_RAW.tar 11.1 Mb (http)(custom) TAR (of CEL)
GSE165902_normalized_data_with_statistics.txt.gz 1.9 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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