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| Status |
Public on Feb 04, 2021 |
| Title |
PolyA-selected RNA expression in whole brains of male BN-Lx/CubPrin and SHR/OlaIpcvPrin |
| Organism |
Rattus norvegicus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
As part of the PhenoGen Project (http://phenogen.org), RNA-Seq data has been collected from whole brain samples of two inbred strains that represent the parental strains from the HXB/BXH recombinant inbred panel, which is part of the Hybrid Rat Diversity Panel. Processed data were generated as part of manuscript, Aptardi predicts polyadenylation sites in sample-specific transcriptomes using high throughput RNA sequencing and DNA sequence.
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| Overall design |
RNA expression levels were examined in 6 male rat whole brain samples. Rats were from two inbred strains, BN-Lx/CubPrin and SHR/OlaIpcvPrin.
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| Contributor(s) |
Tabakoff B, Hoffman PL, Saba LM, Lusk RJ |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Feb 03, 2021 |
| Last update date |
Feb 07, 2021 |
| Contact name |
Laura Maren Saba |
| E-mail(s) |
Laura.Saba@cuanschutz.edu
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| Organization name |
University of Colorado Anschutz Medical Campus
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| Department |
Pharmaceutical Sciences
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| Street address |
12850 East Montview Blvd.
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| City |
Aurora |
| State/province |
CO |
| ZIP/Postal code |
80045 |
| Country |
USA |
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| Platforms (1) |
| GPL14844 |
Illumina HiSeq 2000 (Rattus norvegicus) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA699291 |
| SRA |
SRP304587 |
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