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Series GSE167369 Query DataSets for GSE167369
Status Public on Aug 31, 2021
Title Dynamics of global gene expression and chromatin accessibility of the peripheral nervous system in animal models of persistent pain
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary Shared transcriptomic and epigenetic changes in two animal models improves our understanding of how chromatin structural changes alter dorsal root ganglion (DRG) gene expression under persistent pain conditions.
 
Overall design Examination of gene expression and chromatin accessibility in naïve and injured, male rats.
 
Contributor(s) Stephens KE
Citation(s) 34446036
Submission date Feb 23, 2021
Last update date Aug 31, 2021
Contact name Kimberly E Stephens
E-mail(s) kestephens@uams.edu
Phone 501-364-3307
Organization name University of Arkansas for Medical Sciences
Department Pediatrics
Street address 13 Children's Way
City Little Rock
State/province AR
ZIP/Postal code 72202
Country USA
 
Platforms (1)
GPL18694 Illumina HiSeq 2500 (Rattus norvegicus)
Samples (28)
GSM5102995 Male_CFA_RNArep1
GSM5102996 Male_CFA_RNArep2
GSM5102997 Male_CCI_ATACrep1
Relations
BioProject PRJNA704403
SRA SRP307779

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE167369_ATAC_CCIvN_normalized_coverage.csv.gz 1.9 Mb (ftp)(http) CSV
GSE167369_ATAC_CFAvN_normalized_coverage.csv.gz 2.0 Mb (ftp)(http) CSV
GSE167369_RNAseq-CountTable_CFA.csv.gz 166.2 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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