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Series GSE168518 Query DataSets for GSE168518
Status Public on Mar 09, 2021
Title Mitophagy related expression profiling by high throughput sequencing for human induced pluripotent stem cells (iPSCs) derived astrocytes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The pupose of this study is to explore the mitophagy related transcriptome profiling of the astrocytes differentiated from POLG patient iPSCs compared to the astrocytes generated from healthy control iPSCs.
 
Overall design Examination of mRNA profile in iPSC-derived astrocytes.
Note from submitter: Human raw sequencing data (e.g.FASTQ) cannot be made publicly available due to their sensitive nature, as dictated by Norwegian law. This data can be made available on the basis of reasonable request and following permission from our Regional Ethics Committee (REC).
 
Contributor(s) Liang KX, Chen A
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Mar 08, 2021
Last update date Mar 09, 2021
Contact name Kristina Xiao Liang
E-mail(s) xiao.liang@uib.no
Organization name University of Bergen
Street address Jonas Lies vei 87, P. O. Box 7804
City Bergen
State/province Hordaland
ZIP/Postal code 5021
Country Norway
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (33)
GSM5145224 iPSC-derived astrocytes, CTRL1_1
GSM5145225 iPSC-derived astrocytes, CTRL1_2
GSM5145226 iPSC-derived astrocytes, CTRL1_3
Relations
BioProject PRJNA707599

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168518_DEGs_mitophagy_pathway_CTRL_vs_CP2A.txt.gz 3.1 Kb (ftp)(http) TXT
GSE168518_DEGs_mitophagy_pathway_CTRL_vs_WS5A.txt.gz 3.2 Kb (ftp)(http) TXT
GSE168518_Raw_gene_counts_matrix.txt.gz 3.3 Mb (ftp)(http) TXT
GSE168518_kegg_metabolic_pathway_CTRL_vs_CP2A.txt.gz 4.4 Kb (ftp)(http) TXT
GSE168518_kegg_metabolic_pathway_CTRL_vs_WS5A.txt.gz 4.3 Kb (ftp)(http) TXT
Raw data are available in SRA
Processed data are available on Series record
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