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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Apr 02, 2010 |
| Title |
Multiple Sclerosis Blood Cell mRNA Transcriptome |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
We measured mRNA expression for all known genes in whole blood from 144 individuals, 99 with MS (43 PPMS, 36 RRMS and 20 SPMS). Analysis of gene expression and genotype in these individuals has indicated the dominant genetic association with T cell regulation is matched by the dominant pattern of dysregulation of T cell gene expression in MS and its clinical subtypes.
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| Overall design |
Whole blood mRNA expression was compared between different types of MS and age-matched healthy control to identify differentially expressed genes between them.
The supplementary file 'GSE17048_non-normalized_data.txt' contains non-normalized data for Samples GSM426595-GSM426738.
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| Contributor(s) |
Booth D, Gandhi K |
| Citation(s) |
20190274, 21152067 |
| Submission date |
Jul 10, 2009 |
| Last update date |
Aug 16, 2018 |
| Contact name |
David Richmond Booth |
| E-mail(s) |
david_booth@wmi.usyd.edu.au
|
| Phone |
0061 2 98458498
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| Fax |
0061 2 98913889
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| Organization name |
Westmead Millennium Institute
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| Department |
Immunology
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| Street address |
Darcy Rd
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| City |
Westmead |
| State/province |
NSW |
| ZIP/Postal code |
2145 |
| Country |
Australia |
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| Platforms (1) |
| GPL6947 |
Illumina HumanHT-12 V3.0 expression beadchip |
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| Samples (144)
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| GSM426598 |
healthy control, C055 |
| GSM426599 |
healthy control, C053 |
| GSM426600 |
healthy control, C060 |
| GSM426601 |
healthy control, C043 |
| GSM426602 |
healthy control, C002 |
| GSM426603 |
healthy control, C050 |
| GSM426604 |
healthy control, C036 |
| GSM426605 |
healthy control, C001 |
| GSM426606 |
healthy control, C054 |
| GSM426607 |
healthy control, N40C |
| GSM426608 |
healthy control, C061 |
| GSM426609 |
healthy control, C044 |
| GSM426610 |
healthy control, C003 |
| GSM426611 |
healthy control, C063 |
| GSM426612 |
healthy control, C047 |
| GSM426613 |
healthy control, C008 |
| GSM426614 |
healthy control, N32C |
| GSM426615 |
healthy control, C048 |
| GSM426616 |
healthy control, C010 |
| GSM426617 |
healthy control, C049 |
| GSM426618 |
healthy control, C033 |
| GSM426619 |
healthy control, N37C |
| GSM426620 |
healthy control, C035 |
| GSM426621 |
healthy control, C038 |
| GSM426622 |
healthy control, C045 |
| GSM426623 |
healthy control, C051 |
| GSM426624 |
healthy control, C058 |
| GSM426625 |
healthy control, C041 |
| GSM426626 |
healthy control, N34C |
| GSM426627 |
healthy control, C018 |
| GSM426628 |
healthy control, C039 |
| GSM426629 |
healthy control, C056 |
| GSM426630 |
healthy control, C040 |
| GSM426631 |
healthy control, C057 |
| GSM426632 |
healthy control, C016 |
| GSM426633 |
healthy control, C052 |
| GSM426634 |
healthy control, C059 |
| GSM426635 |
healthy control, C042 |
| GSM426636 |
healthy control, N38C |
| GSM426637 |
healthy control, C062 |
| GSM426638 |
healthy control, C046 |
| GSM426639 |
healthy control, C007 |
| GSM426640 |
RRMS, G004R |
| GSM426641 |
RRMS, N07R |
| GSM426642 |
RRMS, G021R |
| GSM426643 |
RRMS, G003R |
| GSM426644 |
RRMS, G034R |
| GSM426645 |
RRMS, G002R |
| GSM426646 |
RRMS, N18R |
| GSM426647 |
RRMS, G028R |
| GSM426648 |
RRMS, G013R |
| GSM426649 |
RRMS, G006R |
| GSM426650 |
RRMS, N06R |
| GSM426651 |
RRMS, G019R |
| GSM426652 |
RRMS, N19R |
| GSM426653 |
RRMS, G029R |
| GSM426654 |
RRMS, G012R |
| GSM426655 |
RRMS, G033R |
| GSM426656 |
RRMS, G010R |
| GSM426657 |
RRMS, N03R |
| GSM426658 |
RRMS, G008R |
| GSM426659 |
RRMS, G007R |
| GSM426660 |
RRMS, G018R |
| GSM426661 |
RRMS, N26R |
| GSM426662 |
RRMS, N10R |
| GSM426663 |
RRMS, G022R |
| GSM426664 |
RRMS, G015R |
| GSM426665 |
RRMS, N40R |
| GSM426666 |
RRMS, G016R |
| GSM426667 |
RRMS, N08R |
| GSM426668 |
RRMS, N05R |
| GSM426669 |
RRMS, N09R |
| GSM426670 |
RRMS, N16R |
| GSM426671 |
RRMS, G024R |
| GSM426672 |
RRMS, G014R |
| GSM426673 |
RRMS, G030R |
| GSM426674 |
RRMS, G011R |
| GSM426675 |
RRMS, N02R |
| GSM426676 |
SPMS, G038S |
| GSM426677 |
SPMS, N14S |
| GSM426678 |
SPMS, N24S |
| GSM426679 |
SPMS, G025S |
| GSM426680 |
SPMS, G037S |
| GSM426681 |
SPMS, N25S |
| GSM426682 |
SPMS, G026S |
| GSM426683 |
SPMS, N30S |
| GSM426684 |
SPMS, G031S |
| GSM426685 |
SPMS, G032S |
| GSM426686 |
SPMS, G036S |
| GSM426687 |
SPMS, N22S |
| GSM426688 |
SPMS, G001S |
| GSM426689 |
SPMS, N11S |
| GSM426690 |
SPMS, N23S |
| GSM426691 |
SPMS, G023S |
| GSM426692 |
SPMS, N27S |
| GSM426693 |
SPMS, G027S |
| GSM426694 |
SPMS, P038 |
| GSM426695 |
SPMS, P037 |
| GSM426696 |
PPMS, P005 |
| GSM426697 |
PPMS, P044 |
| GSM426698 |
PPMS, P052 |
| GSM426699 |
PPMS, P004 |
| GSM426700 |
PPMS, P043 |
| GSM426701 |
PPMS, P042 |
| GSM426702 |
PPMS, P041 |
| GSM426703 |
PPMS, G017P |
| GSM426704 |
PPMS, P029 |
| GSM426705 |
PPMS, N28P |
| GSM426706 |
PPMS, P045 |
| GSM426707 |
PPMS, G020P |
| GSM426708 |
PPMS, P028 |
| GSM426709 |
PPMS, P031 |
| GSM426710 |
PPMS, N12P |
| GSM426711 |
PPMS, P012 |
| GSM426712 |
PPMS, P035 |
| GSM426713 |
PPMS, P048 |
| GSM426714 |
PPMS, N15P |
| GSM426715 |
PPMS, P009 |
| GSM426716 |
PPMS, P036 |
| GSM426717 |
PPMS, P047 |
| GSM426718 |
PPMS, N21P |
| GSM426719 |
PPMS, P008 |
| GSM426720 |
PPMS, P046 |
| GSM426721 |
PPMS, P050 |
| GSM426722 |
PPMS, P039 |
| GSM426723 |
PPMS, G005P |
| GSM426724 |
PPMS, P007 |
| GSM426725 |
PPMS, N31P |
| GSM426726 |
PPMS, P001 |
| GSM426727 |
PPMS, P002 |
| GSM426728 |
PPMS, N29P |
| GSM426729 |
PPMS, P049 |
| GSM426730 |
PPMS, P040 |
| GSM426731 |
PPMS, G009P |
| GSM426732 |
PPMS, P030 |
| GSM426733 |
PPMS, G035P |
| GSM426734 |
PPMS, P027 |
| GSM426735 |
PPMS, P034 |
| GSM426736 |
PPMS, N41CASE |
| GSM426737 |
PPMS, N33CASE |
| GSM426738 |
PPMS, N20PR |
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| Relations |
| BioProject |
PRJNA117773 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE17048_RAW.tar |
6.2 Mb |
(http)(custom) |
TAR |
| GSE17048_non-normalized_data.txt.gz |
21.0 Mb |
(ftp)(http) |
TXT |
| Processed data included within Sample table |
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