|
| Status |
Public on Jun 27, 2022 |
| Title |
Profiling of Gata2 binding in primary erythroid cells by CUT&RUN |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
The chromatin landscape of developing erythroblasts changes dramatically during differentiation. We have profiled the change in Gata2 binding in primary erythroid cells entering terminal differentiation using CUT&RUN.
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| |
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| Overall design |
This series contains CUT&RUN datasets for Gata2 binding in FACS sorted primary erythroid cells. There are multiple biological replicates for each progenitor population, plus IgG control datasets.
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| Contributor(s) |
Beagrie RA, Higgs DR |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Apr 02, 2021 |
| Last update date |
Jun 30, 2022 |
| Contact name |
Robert A Beagrie |
| E-mail(s) |
robert.beagrie@ndcls.ox.ac.uk
|
| Organization name |
MRC Weatherall Institute of Molecular Medicine
|
| Department |
Molecular Haematology Unit
|
| Street address |
Headley Way
|
| City |
Oxford |
| ZIP/Postal code |
OX39DS |
| Country |
United Kingdom |
| |
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| Platforms (1) |
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| Samples (11)
|
| GSM5224733 |
RB-CR158_Lin+ - Gata2 CUT&RUN replicate 1 |
| GSM5224734 |
RBCR198_Lin+ - Gata2 CUT&RUN replicate 2 |
| GSM5224735 |
RB-CR159_S0 CD71 low - Gata2 CUT&RUN replicate 1 |
| GSM5224736 |
RBCR195_S0 CD71 low - Gata2 CUT&RUN replicate 2 |
| GSM5224737 |
RB-CR160_S0 CD71 medium - Gata2 CUT&RUN replicate 1 |
| GSM5224738 |
RBCR196_S0 CD71 medium - Gata2 CUT&RUN replicate 2 |
| GSM5224739 |
RB-CR161_S1 - Gata2 CUT&RUN replicate 1 |
| GSM5224740 |
RBCR197_S1 - Gata2 CUT&RUN replicate 2 |
| GSM5224741 |
RB-CR162_S2 - Gata2 CUT&RUN replicate 1 |
| GSM5224742 |
RB-CR163_S3 - Gata2 CUT&RUN replicate 1 |
| GSM5224743 |
RB-CR164_S3 - IgG CUT&RUN replicate 1 |
|
| Relations |
| BioProject |
PRJNA719368 |
| SRA |
SRP313234 |
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