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Series GSE171618 Query DataSets for GSE171618
Status Public on Apr 07, 2024
Title RNA-seq analysis CARM1 inhibitor Ellagic acid effect on MDA-MB-231 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Ellagic acid is a kind of polyphenol lactone, which is widely found in various fruits and nuts. It’s the natural inhibitor of CARM1. Ellagic acid was reported to inhibit breast cancer growth and metastasis. But the mechanism of Ellagic acid has not been investivaged clearly in triple-negative breast cancer (TNBC). Our results indicate that direct inhibition of CDK4 by Ellagic acid limits breast cancer proliferation and metastasis. Our research has determined the molecular basis of Ellagic acid effect in TNBC, which may provide new ideas and drugs for cancer therapy.
 
Overall design Ellagic acid or control was added into MDA-MB-231 cells (n=3 per group) for 24 hours. Total RNA was extracted using Trizol reagent (Invitrogen, USA). Agilent 2100 Bioanalyzer (Agilent Technologies, USA) was used to evaluate the RNA quality.
 
Contributor(s) Feng D, Wang Y
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Submission date Apr 07, 2021
Last update date Apr 08, 2024
Contact name yan wang
E-mail(s) yanwang@tmu.edu.cn
Organization name National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital, Chinese Academy of Medical Sciences
Street address 17 panjiayuan nanli, chaoyang district, Beijing, China
City beijing
ZIP/Postal code 100021
Country Zimbabwe
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (6)
GSM5229420 Control-1
GSM5229421 Control-2
GSM5229422 Control-3
Relations
BioProject PRJNA720319
SRA SRP313795

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171618_RAW.tar 2.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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