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Series GSE171798 Query DataSets for GSE171798
Status Public on Jun 02, 2021
Title Enterocytes, fibroblasts and myeloid cells synergize in anti-bacterial and anti-viral pathways with IL22 as the central cytokine.
Organism Mus musculus
Experiment type Expression profiling by array
Summary IL22 is an important cytokine involved in the intestinal defense mechanisms against microbiome. By using ileum-derived organoids, we show that the expression of anti-microbial peptides (AMPs) and anti-viral peptides (AVPs) can be induced by IL22. In addition, we identified a bacterial and a viral route, both leading to IL22 production by T cells, but via different pathways. Bacterial products, such as LPS, induce enterocyte-secreted SAA1, which triggers the secretion of IL6 in fibroblasts, and subsequently IL22 in T cells. This IL22 induction can then be enhanced by macrophage-derived TNFα in two ways: by enhancing the responsiveness of T cells to IL6 and by increasing the expression of IL6 by fibroblasts. Viral infections of intestinal cells induce IFNβ1 and subsequently IL7. IFNβ1 can induce the expression of IL6 in fibroblasts and the combined activity of IL6 and IL7 can then induce IL22 expression in T cells. We also show that IL22 reduces the expression of viral entry receptors (e.g. ACE2, TMPRSS2, DPP4, CD46 and TNFRSF14), increases the expression of anti-viral proteins (e.g. RSAD2, AOS, ISG20 and Mx1) and, consequently, reduces the viral infection of neighboring cells. Overall, our data indicates that IL22 contributes to the innate responses against both bacteria and viruses.
 
Overall design Microarray analysis was performed on ileum organoids (isolated from C57/BL6 mice) that were grown in 3D (matrigel) or 2D (on Collagen I) for 2 days and were subsequently treated with mIL22 (5 ng/ml) or vehicle for 24 hrs.
 
Contributor(s) ten Klooster JP, Bol-Schoenmakers M, Bijsmans IW, van Summeren K, van Vliet AL, de Haan CA, van Kuppeveld FJ, Verkoeijen S, Pieters R
Citation(s) 34045640
Submission date Apr 09, 2021
Last update date Jun 02, 2021
Contact name Guido Hooiveld
E-mail(s) guido.hooiveld@wur.nl
Organization name Wageningen University
Department Div. Human Nutrition & Health
Lab Nutrition, Metabolism & Genomics Group
Street address HELIX, Stippeneng 4
City Wageningen
ZIP/Postal code NL-6708WE
Country Netherlands
 
Platforms (1)
GPL17400 [MoGene-2_1-st] Affymetrix Mouse Gene 2.1 ST Array [transcript (gene) version]
Samples (12)
GSM5234386 ileum organoid, 3D matrigel, vehicle, replicate 1
GSM5234387 ileum organoid, 3D matrigel, vehicle, replicate 2
GSM5234388 ileum organoid, 3D matrigel, vehicle, replicate 3
Relations
BioProject PRJNA720931

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Supplementary file Size Download File type/resource
GSE171798_RAW.tar 58.0 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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