|
| Status |
Public on May 05, 2024 |
| Title |
Expression data from early and macroscopic HCC lesions isolated from the Rb family Triple Knock Out model (ATAC-Seq) |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
we report the chromatin conformation profile of various liver progenitor subpopulations upon inactivation of the Rb family of proteins.
|
| |
|
| Overall design |
YFP+ cells fractioned on the basis of Thy1 and Epcam surface expression are isolated by flow cytomtry prior to standard processing for ATAC-Seq.
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| |
|
| Contributor(s) |
Viatour P |
| Citation missing |
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| Submission date |
May 05, 2021 |
| Last update date |
May 05, 2024 |
| Contact name |
Patrick Viatour |
| E-mail(s) |
viatourp@chop.edu
|
| Organization name |
Children's Hospital of Philadelphia
|
| Street address |
3501 Civic Center Blvd
|
| City |
Philadelphia |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (8)
|
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| This SubSeries is part of SuperSeries: |
| GSE173952 |
Expression data from early and macroscopic HCC lesions isolated from the Rb family Triple Knock Out model |
|
| Relations |
| BioProject |
PRJNA727599 |
| SRA |
SRP318626 |
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