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| Status |
Public on May 05, 2024 |
| Title |
Expression data from early and macroscopic HCC lesions isolated from the Rb family Triple Knock Out model (scRNA-Seq) |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
we report the mRNA expression of single cells at two different time points of HCC development upon inactivation of Rb family. The first time point corresponds to lesions appearing in the portal triad area 9 weeks after Rb family inactivation. The second time point corresponds to macroscopic tumors, typically visible at the 20-25 weeks time point.
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| Overall design |
YFP+ cells collected from each time point (a pool of three mice for early lesions) are processed for 10x sc-Seq analysis
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| Contributor(s) |
Viatour P |
| Citation missing |
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| Submission date |
May 05, 2021 |
| Last update date |
May 05, 2024 |
| Contact name |
Patrick Viatour |
| E-mail(s) |
viatourp@chop.edu
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| Organization name |
Children's Hospital of Philadelphia
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| Street address |
3501 Civic Center Blvd
|
| City |
Philadelphia |
| ZIP/Postal code |
19104 |
| Country |
USA |
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| Platforms (1) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE173952 |
Expression data from early and macroscopic HCC lesions isolated from the Rb family Triple Knock Out model |
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| Relations |
| BioProject |
PRJNA727595 |
| SRA |
SRP318628 |
