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Series GSE178417 Query DataSets for GSE178417
Status Public on Jun 05, 2023
Title Profiling of a series of triple positive (CD10+BCL6+MUM1+) diffuse large B-cell lymphoma cases
Organism Homo sapiens
Experiment type Genome variation profiling by array
Genome variation profiling by SNP array
Summary Gene expression profiling (GEP) divides DLBCL according to the cell of origin into GCB, ABC and unclassifiable, exhibiting different mutational profiles. The Hans algorithm, a surrogate of GEP, classifies cases expressing CD10, BCL6 and MUM1 as GCB but it is not clear whether all these cases correspond to GCB-type. Accordingly, LBCL with IRF4 rearrangement usually expresses GCB phenotype (CD10+, BCL6+) together with strong MUM1/IRF4.
 
Overall design The aim of this study was to characterize the molecular heterogeneity of DLBCL triple positive (CD10+ BCL6+MUM1+) in adults. CN alterations were examined in 9 out of 13 cases with available material and IRF4 rearrangement and/or IRF4 mutations using OncoScan platform
 
Contributor(s) Castrejon-de-Anta N, Frauenfeld L, Balagué O, Quintanilla-Martinez L
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Submission date Jun 17, 2021
Last update date Jun 07, 2023
Contact name Joan Enric Ramiz-Zaldivar
E-mail(s) ramis@clinic.cat
Phone +34 932275400
Organization name IDIBAPS
Department Molecular Pathology Laboratory
Lab Centre Esther Koplowitz (CEK)
Street address Rosselló, 153
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platforms (1)
GPL21558 [OncoScan_CNV] Affymetrix OncoScan CNV FFPE Assay
Samples (9)
GSM5390786 Triple Positive DLBCL 2
GSM5390787 Triple Positive DLBCL 5
GSM5390788 Triple Positive DLBCL 16
Relations
BioProject PRJNA738923

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE178417_RAW.tar 218.3 Mb (http)(custom) TAR (of CEL, OSCHP)
Processed data provided as supplementary file
Processed data are available on Series record

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