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GEO accession:
Series GSE179512
Query DataSets for GSE179512
Status
Public on Oct 04, 2022
Title
Thymic development of type-17 innate-like T cells depends on PTEN
Organism
Mus musculus
Experiment type
Expression profiling by array
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36302969
Submission date
Jul 06, 2021
Last update date
Jan 03, 2023
Contact name
Hongbo Chi
E-mail(s)
hongbo.chi@stjude.org
Organization name
St Jude Children's Research Hospital
Department
Immunology
Street address
262 Danny Thomas Place
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platforms (2)
GPL21103
Illumina HiSeq 4000 (Mus musculus)
GPL23038
[Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (89)
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More...
GSM4610727
DBR893: Pre-selection DP (A) WT #1
GSM4610728
DBR894: Pre-selection DP (A) WT #2
GSM4610729
DBR895: Pre-selection DP (A) WT #3
GSM4610730
DBR896: Pre-selection DP (A) Pten-Het #1
GSM4610731
DBR897: Pre-selection DP (A) Pten-Het #2
GSM4610732
DBR898: Pre-selection DP (A) Pten-Het #3
GSM4610733
DBR899: Pre-selection DP (A) Pten-KO #1
GSM4610734
DBR900: Pre-selection DP (A) Pten- KO#2
GSM4610735
DBR901: Pre-selection DP (A) Pten-KO #9
GSM4610736
DBR902: Post-Selection DP (B) WT #1
GSM4610737
DBR903: Post-Selection DP (B) WT #2
GSM4610738
DBR904: Post-Selection DP (B) WT #3
GSM4610739
DBR905: Post-Selection DP (B) Pten-Het #1
GSM4610740
DBR906: Post-Selection DP (B) Pten-Het #2
GSM4610741
DBR907: Post-Selection DP (B) Pten-Het #3
GSM4610742
DBR908: Post-Selection DP (B) Pten-KO #1
GSM4610743
DBR909: Post-Selection DP (B) Pten-KO #2
GSM4610744
DBR910: Post-Selection DP (B) Pten-KO #3
GSM5419549
wild-type GEX1
GSM5419550
wild-type GEX2
GSM5419553
PTEN T cell-specific knockout GEX1
GSM5419554
PTEN T cell-specific knockou GEXt2
GSM5419555
wild-type VDJ1
GSM5419556
wild-type VDJ2
GSM5419559
PTEN T cell-specific knockout VDJ1
GSM5419560
PTEN T cell-specific knockout VDJ2
GSM6254883
wild-type GEX1, experiment 2
GSM6254884
wild-type GEX2, experiment 2
GSM6254885
PTEN T cell-specific knockout GEX1, experiment 2
GSM6254886
wild-type VDJ1, experiment 2
GSM6254887
wild-type VDJ2, experiment 2
GSM6254888
PTEN T cell-specific knockout VDJ1, experiment 2
GSM6254919
JLR804
GSM6254920
JLR806
GSM6254921
JLR808
GSM6254922
JLR810
GSM6254923
JLR812
GSM6254924
JLR814
GSM6254925
JLR816
GSM6254926
JLR818
GSM6254927
JLR820
GSM6254928
JLR822
GSM6254929
JLR824
GSM6254930
JLR826
GSM6255005
PWL001
GSM6255006
PWL002
GSM6255007
PWL003
GSM6255008
PWL004
GSM6255009
PWL005
GSM6255010
PWL006
GSM6255011
PWL007
GSM6255012
PWL008
GSM6255013
PWL009
GSM6255014
PWL011
GSM6255015
PWL012
GSM6255016
PWL013
GSM6255017
PWL014
GSM6255018
PWL015
GSM6255019
PWL016
GSM6255020
PWL017
GSM6255021
PWL018
GSM6255022
PWL019
GSM6255023
PWL020
GSM6255024
PWL021
GSM6255025
PWL022
GSM6255026
PWL025
GSM6255027
PWL026
GSM6255028
PWL027
GSM6255029
PWL028
GSM6255030
PWL029
GSM6255031
PWL030
GSM6255032
PWL031
GSM6255033
PWL032
GSM6255034
PWL035
GSM6255035
PWL036
GSM6255036
PWL037
GSM6255037
PWL040
GSM6255038
PWL041
GSM6255039
PWL042
GSM6255040
PWL043
GSM6255041
PWL044
GSM6255042
PWL045
GSM6255043
PWL048
GSM6255044
PWL049
GSM6255045
PWL051
GSM6255046
PWL053
GSM6255047
PWL054
GSM6255048
PWL055
GSM6255049
PWL056
This SuperSeries is composed of the following SubSeries:
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GSE152294
Thymic development of type-17 innate-like T cells depends on a PTEN-coordinated two-step process linking TCR and IL-23–IL-23R–Stat3 axis
GSE179511
Metabolic reprogramming of innate-like T cell fate and tissue homeostasis by PTEN [scRNA- and scTCR-seq]
GSE206458
PTEN directs developmental and metabolic signaling for innate-like T cells fate and tissue homeostasis [scRNA-seq and scTCR-seq Exp2]
GSE206462
PTEN directs developmental and metabolic signaling for innate-like T cells fate and tissue homeostasis [Stat3KO rescue]
GSE206467
PTEN directs developmental and metabolic signaling for innate-like T cells fate and tissue homeostasis [Raptor_or_Rictor_KO_rescue]
Relations
BioProject
PRJNA744084
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE179512_RAW.tar
677.3 Mb
(http)
(custom)
TAR (of CEL, CSV, TAR)
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