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| Status |
Public on Sep 01, 2021 |
| Title |
Expression data from mouse kidney intraperitoneally administered with LPS and Stx |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
Mice intraperitoneally administered with LPS and Stx exhibit HUS-like pathology. While mouse and human Gb3 localization is different, LPS and Stx induced kidney injury models in mice have been used to confirm responsiveness to various stx-related inflammatory pathways and treatments. In order for this mouse model to apply tHUS in humans, more detailed and exhaustive comprehension of this animal model is needed. Although molecular studies have been conducted on this mouse model before, we consider that there is still scope for further investigation of molecular pathways and studies on kidney damage segments. Overall, Biological pathways, upstream regulators, and downstream biological activities occurring in the kidney after LPS/Stx administration were identified through Ingenuity Pathway Analysis ™ using the result of microarray. In addition, we identified the detailed damaged site in the renal tubule from the down-regulation gene revealed by microarray.
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| Overall design |
Quality of the RNA was analyzed by a Bioanalyzer 2100. We performed gene expression microarray analysis of kidney from mice treated with Stx and LPS, and control mice
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| Contributor(s) |
Kume Y, Go H, Suyama K |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jul 20, 2021 |
| Last update date |
Sep 03, 2021 |
| Contact name |
Yohei Kume |
| E-mail(s) |
kumetti@fmu.ac.jp
|
| Phone |
024-547-1295
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| Organization name |
Fukushima Medical University
|
| Department |
Pediatrics
|
| Street address |
1, Hikarigaoka
|
| City |
Fukushima |
| State/province |
Fukushima |
| ZIP/Postal code |
960-1247 |
| Country |
Japan |
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| Platforms (1) |
| GPL23038 |
[Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay) |
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| Samples (12)
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| GSM5463622 |
Mouse kidney intraperitoneally administered with LPS and Stx_6h_1 |
| GSM5463623 |
Mouse kidney intraperitoneally administered with LPS and Stx_6h_2 |
| GSM5463624 |
Mouse kidney intraperitoneally administered with LPS and Stx_6h_3 |
| GSM5463625 |
Mouse kidney intraperitoneally administered with LPS and Stx_6h_4 |
| GSM5463626 |
Control kidney_1 |
| GSM5463627 |
Control kidney_2 |
| GSM5463628 |
Control kidney_3 |
| GSM5463629 |
Control kidney_5 |
| GSM5463630 |
Mouse kidney intraperitoneally administered with LPS and Stx_72h_1 |
| GSM5463631 |
Mouse kidney intraperitoneally administered with LPS and Stx_72h_2 |
| GSM5463632 |
Mouse kidney intraperitoneally administered with LPS and Stx_72h_3 |
| GSM5463633 |
Mouse kidney intraperitoneally administered with LPS and Stx_72h_4 |
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| Relations |
| BioProject |
PRJNA748385 |
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