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| Status |
Public on May 31, 2022 |
| Title |
Single-cell multi-omics dataset of hepatocellular carcinoma cell lines |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
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| Summary |
We interrogated single-cell transcriptomes, proteomes and epigenetic information revealing metastasis potential heterogeneity in 5 HCC cell lines across metastasis capacity.
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| Overall design |
We performed CITE-seq, scATAC-seq and scRNA-seq on five HCC cell lines which have diverse metastatic abilities and six markers of liver cancer stem cell (LCSC) were measured,including CD44, EPCAM, CD133, CD24, CD90, and CD54.
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| Contributor(s) |
Wang S, Xie J, Zou X, Yu Q |
| Citation missing |
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| BioProject |
PRJNA772168 |
| Submission date |
Nov 05, 2021 |
| Last update date |
Jun 02, 2022 |
| Contact name |
CNSA CNGB |
| Organization name |
BGI
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| Street address |
BGI
|
| City |
shenzhen |
| ZIP/Postal code |
518083 |
| Country |
China |
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| Platforms (2) |
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| Samples (10)
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