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Series GSE18882 Query DataSets for GSE18882
Status Public on Nov 04, 2010
Title Effect of cellular and viral miRNAs on target RNA half-life in three human B-cell lines
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Total, nascent and unlabeled RNA were prepared following 1h of labeling with 100 µM 4-thiouridine and 3 replicates analyzed by Affymetrix Gene ST 1.0 arrays
 
Overall design Transcript half-lives were determined in DG75-eGFP, DG75-10/12 and BCBL-1 based on nascent/total RNA ratios; unlabeled RNA was analyzed in addition
 
Contributor(s) Dölken L, Malterer G, Hoffmann R, Zimmer R, Koszinowski UH, Haas J
Citation(s) 20413099
Submission date Nov 04, 2009
Last update date Jul 26, 2018
Contact name Lars Dölken
E-mail(s) Lars.Doelken@uni-wuerzburg.de
Organization name University of Cambridge
Department Medicine
Lab Box 157, Level 5
Street address Addenbrookes Hospital, Hills Road
City Cambridge
State/province Cambridgeshire
ZIP/Postal code CB20QQ
Country United Kingdom
 
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (27)
GSM468013 Total RNA of DG75-eGFP replicate 1
GSM468014 Total RNA of DG75-eGFP replicate 2
GSM468015 Total RNA of DG75-eGFP replicate 3
Relations
BioProject PRJNA121277

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18882_RAW.tar 98.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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