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Series GSE190209 Query DataSets for GSE190209
Status Public on Feb 28, 2022
Title Gene expression data from the syngeneic mouse endometriosis model
Organism Mus musculus
Experiment type Expression profiling by array
Summary Retrograde menstruation is considered a major reason for the development of endometriosis. The syngeneic transplantation mouse model is an endometriosis animal model that is considered to mimic retrograde menstruation. However, it remains poorly understood which genetic signatures of endometriosis are reflected in this model.
Here, we employed an in vivo syngeneic mouse endometriosis model and identified differentially expressed genes (DEGs) between the ectopic and eutopic tissues using microarray analysis.
 
Overall design Total RNA was isolated from the mouse ectopic cystic tissue or uterus using an RNeasy Lipid Tissue Mini Kit (Qiagen Inc., Hilden, Germany) (n = 5 animals per group). Purified RNA was labeled by using the GeneChip WT Plus Reagent Kit (Thermo Fisher Scientific, Inc.), then hybridized to a Clariom S Mouse Array (Thermo Fisher Scientific, Inc.).
 
Contributor(s) Iwasaki S, Kaneda K
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Submission date Dec 05, 2021
Last update date Mar 02, 2022
Contact name Shiho Iwasaki
E-mail(s) s.iwasaki@po.nippon-shinyaku.co.jp
Phone 07024505910
Organization name Nippon Shinyaku Co., Ltd.
Street address 14, Nishinosho-monguchi-cho, Kisshoin, Minami-ku
City Kyoto
State/province Kyoto
ZIP/Postal code 6018550
Country Japan
 
Platforms (1)
GPL23038 [Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (15)
GSM5718121 Model_ectopic_cyst_1
GSM5718122 Model_ectopic_cyst_2
GSM5718123 Model_ectopic_cyst_3
Relations
BioProject PRJNA786343

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190209_Matrix1.xlsx 2.5 Mb (ftp)(http) XLSX
GSE190209_Matrix2.xlsx 2.5 Mb (ftp)(http) XLSX
GSE190209_RAW.tar 16.2 Mb (http)(custom) TAR (of CEL)
Processed data are available on Series record

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