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Series GSE192908 Query DataSets for GSE192908
Status Public on Jan 06, 2022
Title Lycopene supplementation in serum-free maturation medium improves bovine in vitro embryo development, quality, and modulates embryonic transcriptomic profile
Organism Bos taurus
Experiment type Expression profiling by high throughput sequencing
Summary Bovine embryos are typically cultured at reduced oxygen tension to lower the impact of oxidative stress on embryo development. However, oocyte in vitro maturation (IVM) is performed at atmospheric oxygen tension since low oxygen during maturation has a negative impact on oocyte developmental competence. Lycopene, a carotenoid, acts as a powerful antioxidant and may protect the oocyte against oxidative stress during maturation at atmospheric oxygen conditions. Here, we assessed the effect of adding 0.2 μM lycopene (antioxidant), 5 μM menadione (pro-oxidant), and their combination on reactive oxygen species (ROS) generation in mature oocytes and subsequent blastocyst development, quality, and transcriptome in a bovine in vitro model. ROS fluorescent intensity in mature oocytes was significantly lower in the lycopene group, and resulting embryos showed a significantly higher blastocyst rate on day 8 and lower apoptotic cell ratio than all other groups. Transcriptomic analysis disclosed a total of 296 differentially expressed genes (Benjamin-Hochberg adjusted P < 0.05 and ≥ 1 log2 fold change) between lycopene and control groups with pathways associated with cellular function, metabolism, DNA repair, and anti-apoptosis upregulated in lycopene. Lycopene supplementation in serum-free maturation medium neutralizes excess ROS during maturation, enhances blastocyst development and quality, and modulates the transcriptomic landscape.
 
Overall design We hypothesized that supplementation of antioxidants in a serum-free maturation medium would be effective in obtaining optimal ROS neutralization and maintenance of equilibrium during IVM and embryo development. This study aimed to assess if lycopene supplementation in serum-free maturation medium reduces ROS generation in matured oocytes and improves subsequent embryo development, quality, transcriptomic profile, and whether lycopene supplementation during maturation exerted extended protective actions on vitrified-warmed embryos.
 
Contributor(s) Sidi S, Bogado Pascottini O, Angel-Velez D, Azari-Dolatabad N, Chaitanya Pavani K, Residiwati G, Meese T, Van Nieuwerburgh F, Kambai Bawa E, Alikidon Voh A, Olusegun Ayo J, Van Soom A
Citation(s) 35204226
Submission date Jan 03, 2022
Last update date Mar 03, 2022
Contact name Osvaldo Bogado Pascottini
E-mail(s) osvaldo.bogado@ugent.be
Phone 0032497177718
Organization name Ghent University
Street address Salisburylaan 133
City Merelbeke
State/province Flanders
ZIP/Postal code B-9820
Country Belgium
 
Platforms (1)
GPL23055 Illumina NextSeq 500 (Bos taurus)
Samples (8)
GSM5768767 C1
GSM5768768 C2
GSM5768769 C3
Relations
BioProject PRJNA793780

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE192908_normalized_counts_deseq2.txt.gz 203.1 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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