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GEO accession:
Series GSE196458
Query DataSets for GSE196458
Status
Public on Mar 31, 2022
Title
MicroRNA 3'-compensatory pairing occurs through two binding modes, with affinity shaped by nucleotide identity and position
Organisms
Mus musculus
;
synthetic construct
Experiment type
Non-coding RNA profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
35191832
Submission date
Feb 09, 2022
Last update date
May 10, 2022
Contact name
Sean E. McGeary
E-mail(s)
sean_mcgeary@hms.harvard.edu
Organization name
Whitehead Institute / MIT
Department
Biology
Lab
Bartel Lab
Street address
455 Main St.
City
Cambridge
State/province
MA
ZIP/Postal code
02142
Country
USA
Platforms (2)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL19604
Illumina HiSeq 2500 (synthetic construct)
Samples (64)
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More...
GSM5324587
let-7a-21nt_purification1_inputlibrary
GSM5324588
let-7a-21nt_purification1_40percent
GSM5324589
let-7a-21nt_purification1_12.65percent_rep1
GSM5324590
let-7a-21nt_purification1_12.65percent_rep2
GSM5324591
let-7a-21nt_purification1_4percent
GSM5324592
let-7a-21nt_purification1_1.265percent
GSM5324593
let-7a-21nt_purification1_0.4percent
GSM5324594
let-7a-21nt_purification1_0percent
GSM5324595
let-7a-21nt_purification2_inputlibrary
GSM5324596
let-7a-21nt_purification2_40percent
GSM5324597
let-7a-21nt_purification2_12.65percent
GSM5324598
let-7a-21nt_purification2_4percent
GSM5324599
let-7a-21nt_purification2_1.265percent
GSM5324600
let-7a-21nt_purification2_0.4percent
GSM5324601
let-7a-21nt_purification2_0percent
GSM5324602
miR-1_purification_1_inputlibrary
GSM5324603
miR-1_purification_1_40percent
GSM5324604
miR-1_purification_1_12.65percent
GSM5324605
miR-1_purification_1_4percent
GSM5324606
miR-1_purification_1_1.265percent
GSM5324607
miR-1_purification_1_0.4percent
GSM5324608
miR-1_purification_1_0percent
GSM5324609
let-7a(+1),let-7a(-1)_purification1_inputlibrary
GSM5324610
let-7a(+1)_purification1_40percent
GSM5324611
let-7a(+1)_purification1_12.65percent
GSM5324612
let-7a(+1)_purification1_4percent
GSM5324613
let-7a(+1)_purification1_1.265percent
GSM5324614
let-7a(+1)_purification1_0.4percent
GSM5324615
let-7a(+1)_purification1_0percent
GSM5324616
let-7a(-1)_purification1_40percent
GSM5324617
let-7a(-1)_purification1_12.65percent
GSM5324618
let-7a(-1)_purification1_4percent
GSM5324619
let-7a(-1)_purification1_1.265percent
GSM5324620
let-7a(-1)_purification1_0.4percent
GSM5324621
let-7a(-1)_purification1_0percent
GSM5324622
miR-155_purification_1_inputlibrary
GSM5324623
miR-155_purification_1_40percent
GSM5324624
miR-155_purification_1_12.65percent
GSM5324625
miR-155_purification_1_4percent
GSM5324626
miR-155_purification_1_1.265percent
GSM5324627
miR-155_purification_1_0.4percent
GSM5324628
miR-155_purification_1_0percent
GSM5324629
let-7a-miR-155_purification1_inputlibrary
GSM5324630
let-7a-miR-155_purification1_40percent
GSM5324631
let-7a-miR-155_purification1_12.65percent
GSM5324632
let-7a-miR-155_purification1_4percent
GSM5324633
let-7a-miR-155_purification1_1.265percent
GSM5324634
let-7a-miR-155_purification1_0.4percent
GSM5324635
let-7a-miR-155_purification1_0percent
GSM5324636
miR-155-let-7a_purification1_inputlibrary
GSM5324637
miR-155-let-7a_purification1_40percent
GSM5324638
miR-155-let-7a_purification1_12.65percent
GSM5324639
miR-155-let-7a_purification1_4percent
GSM5324640
miR-155-let-7a_purification1_1.265percent
GSM5324641
miR-155-let-7a_purification1_0.4percent
GSM5324642
miR-155-let-7a_purification1_0percent
GSM5884591
mpra_mock_rep1
GSM5884592
mpra_miR-1_rep1
GSM5884593
mpra_let-7a_rep1
GSM5884594
mpra_let-7a-21nt_rep1
GSM5884595
mpra_mock_rep2
GSM5884596
mpra_miR-1_rep2
GSM5884597
mpra_let-7a_rep2
GSM5884598
mpra_let-7a-21nt_rep2
This SuperSeries is composed of the following SubSeries:
GSE174715
MicroRNA 3'-compensatory pairing occurs through two binding modes, with affinity shaped by nucleotide identity and position [1]
GSE196457
MicroRNA 3'-compensatory pairing occurs through two binding modes, with affinity shaped by nucleotide identity and position [2]
Relations
BioProject
PRJNA804960
Download family
Format
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Supplementary data files not provided
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