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Series GSE196494 Query DataSets for GSE196494
Status Public on May 01, 2022
Title Gene expression (GeneChip) data from parental (wild-type) and CRMP2A KO (CRISPR) A549 cells.
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We sought to assess how permanent loss of the microtubule-associated protein CRMP2A could affect global gene expression in the A549 lung cancer cells.
We used microarrays to identify differentially regulated genes when CRMP2A is permanently removed from A549 cells using CRISPR/Cas9.
 
Overall design Parental (wild-type) and CRMP2A KO (CRISPR) cells were cultured under identical conditions for RNA extraction and hybridization on Affymetrix microarrays. We sought to compare the gene expression profiles between the two cell lines and correlate it with other in vitro and in vivo findings.
 
Contributor(s) Boukouris AE, Michelakis ED
Citation(s) 35294884
Submission date Feb 10, 2022
Last update date Aug 04, 2022
Contact name Evangelos D. Michelakis
E-mail(s) em2@ualberta.ca
Phone (780) 407-1576
Organization name University of Alberta
Department Medicine
Street address 8440 - 112 St
City Edmonton
State/province Alberta
ZIP/Postal code T6G 2B7
Country Canada
 
Platforms (1)
GPL15207 [PrimeView] Affymetrix Human Gene Expression Array
Samples (2)
GSM5885493 CRMP2A KO A549 cells
GSM5885494 Wild-Type A549 cells
Relations
BioProject PRJNA805208

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196494_RAW.tar 4.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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