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Series GSE199643 Query DataSets for GSE199643
Status Public on Oct 04, 2022
Title Dual specificity and target gene selection by the MADS domain protein FRUITFULL
Organism synthetic construct
Experiment type Other
Summary How transcription factors of a single family confer different functional specificities in vivo, is an important question in molecular biology. Even more intriguingly, a single transcription factor can regulate context- or tissue-specific target genes to achieve distinct functions. Here we show, using a variety of genome-wide techniques, that gene regulation and DNA binding site selection by the MADS domain protein FRUITFULL (FUL) is tissue-specific. FUL has a dual role in regulating floral transition and fruit development.
 
Overall design SELEX-seq experiments of several Arabidopsis MADS-domain transcription factor dimers.
 
Contributor(s) van Mourik H, Bemer M, Muino JM, Angenent G
Citation(s) 36797351
Submission date Mar 28, 2022
Last update date May 22, 2023
Contact name Jose M. Muino
E-mail(s) jose.muino@hu-berlin.de
Organization name Humboldt University
Department Department of Biology
Street address Rhoda-⁠Erdmann-⁠Haus (Haus 22); R 1216 Philippstr. 11-⁠13;
City Berlin
ZIP/Postal code 10115
Country Germany
 
Platforms (1)
GPL15228 Illumina HiSeq 2000 (synthetic construct)
Samples (28)
GSM5979736 FUL-AG_Round0
GSM5979737 FUL-AG_Round3
GSM5979738 FUL-AG_Round4
Relations
BioProject PRJNA820961

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE199643_RAW.tar 48.9 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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