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Series GSE202313 Query DataSets for GSE202313
Status Public on May 04, 2023
Title A hPSC system for characterizing MUC5B-expressing airway epithelia
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary scRNA-seq of air-liquid interface airway epithelial cultures derived from a human fluorescent reporter hPSC line labeling MUC5B-expressing cells
 
Overall design A biallelic MUC5B-tdTomato reporter hPSC line was generated from an individual with progressive fibrotic interstitial lung disease and homozygous for the MUC5B rs35705950 risk allele. Derived airway-ALI cultures were differentiated from this line and sequenced 21 days following air-phase transition.
 
Contributor(s) Si S, Wang F, Kotton D
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Submission date May 05, 2022
Last update date May 07, 2023
Contact name Feiya Wang
E-mail(s) feiyaw@bu.edu
Organization name Center for Regenerative Medicine, Boston University
Street address 670 Albany street, 2nd floor
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platforms (1)
GPL30173 NextSeq 2000 (Homo sapiens)
Samples (1)
GSM6108276 MUC5B T/TtdT/tdT laminin ALI
Relations
BioProject PRJNA835444

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE202313_RAW.tar 14.6 Mb (http)(custom) TAR (of H5)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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