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| Status |
Public on May 01, 2024 |
| Title |
Accumulating Oxidative DNA Damage in Reconstituting T-cells is Associated with Disease Relapse and Inferior Survival Following Allo-SCT [RNAseq in vivo] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Oxidative T-cell DNA damage impacts GVL
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| Overall design |
Comparative gene expression profiling analysis of RNA-seq data for T-cells of allogeneic transplanted patients with high oxidative DNA damage (n = 5) to T-cells of allogeneic transplanted patients with low oxidative DNA damage (n =5)
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| Contributor(s) |
Karl F, Liang C, Böttcher-Loschinski R, Mougiakakos D |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
May 25, 2022 |
| Last update date |
May 01, 2024 |
| Contact name |
Chunguang Liang |
| E-mail(s) |
liang@biozentrum.uni-wuerzburg.de
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| Phone |
09313184561
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| Organization name |
Biozentrum
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| Department |
Bioinformatics
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| Lab |
Dr. Chunguang Liang
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| Street address |
Bioinformatik, Biozentrum, Uni Würzburg, Am Hubland
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| City |
Würzburg 97074 |
| State/province |
Bayern |
| ZIP/Postal code |
97074 |
| Country |
Germany |
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| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
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| Samples (10)
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| GSM6191293 |
T-cells allo-HSCT, d+43 ex vivo, 8-OHdG low, 1 [KMT120d43] |
| GSM6191294 |
T-cells allo-HSCT,d+52 ex vivo, 8-OHdG high, 1 [KMT126d52] |
| GSM6191295 |
T-cells allo-HSCT, d+90 ex vivo, 8-OHdG high, 2 [KMT138d90] |
| GSM6191296 |
T-cells allo-HSCT, d+105 ex vivo, 8-OHdG low, 2 [KMT51d105] |
| GSM6191297 |
T-cells allo-HSCT, d+106 ex vivo, 8-OHdG low, 3 [KMT65d106] |
| GSM6191298 |
T-cells allo-HSCT, d+106 ex vivo, 8-OHdG high, 3 [KMT78d106] |
| GSM6191299 |
T-cells allo-HSCT, d+105 ex vivo, 8-OHdG low, 4 [KMT82d105] |
| GSM6191300 |
T-cells allo-HSCT, d+106 ex vivo, 8-OHdG high, 4 [KMT87d106] |
| GSM6191301 |
T-cells allo-HSCT, d+100 ex vivo, 8-OHdG high, 5 [KMT89d100] |
| GSM6191302 |
T-cells allo-HSCT, d+105 ex vivo, 8-OHdG low, 5 [KMT94d105] |
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| This SubSeries is part of SuperSeries: |
| GSE204783 |
Accumulating Oxidative DNA Damage in Reconstituting T-cells is Associated with Disease Relapse and Inferior Survival Following Allo-SCT |
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| Relations |
| BioProject |
PRJNA842336 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE204782_Invivo_normalized_count.csv.gz |
935.0 Kb |
(ftp)(http) |
CSV |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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