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Series GSE20512 Query DataSets for GSE20512
Status Public on May 05, 2010
Title Chromatin Analysis of Wilms Tumor Highlights Stem Cell Properties and a Renal Developmental Network
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Wilms tumors are pediatric cancers thought to arise from kidney-specific stem cells. In order to identify transcriptional and epigenetic mechanisms that drive these malignant cells, we compared genomewide chromatin profiles of Wilms tumors to embryonic stem (ES) cells and normal kidney.
 
Overall design Data represent examination of genome-wide chromatin modifications in primary Wilms tumors, fetal and mature kidney.
 
Contributor(s) Aiden AP, Rivera MN
Citation(s) 20569696
Submission date Feb 24, 2010
Last update date Feb 21, 2019
Contact name Noam Shoresh
E-mail(s) noamshoresh@gmail.com
Phone 617-714-7907
Organization name Broad Institute
Department Epigenomics
Street address 7 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL9052 Illumina Genome Analyzer (Homo sapiens)
Samples (12)
GSM515638 Tumor1_K4
GSM515639 Tumor1_K27
GSM515640 Tumor2_K4
Relations
BioProject PRJNA125231

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20512_RAW.tar 137.6 Mb (http)(custom) TAR (of WIG)
Processed data provided as supplementary file

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