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Series GSE20647 Query DataSets for GSE20647
Status Public on Mar 06, 2010
Title Expression analysis of AOM-induced tumors and serrated tumors in mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Abstract: Colonic cancers with a serrated morphology have been proposed to comprise a molecularly distinct tumor entity following an alternative pathway of genetic alterations independently of APC mutations. Here we demonstrate that intestinal cell specific expression of oncogenic K-rasG12D in mice induces serrated hyperplasia, which is characterized by p16ink4a overexpression and induction of senescence. Deletion of Ink4a/Arf in K-rasG12D expressing mice prevents senescence and leads to invasive, metastasizing carcinomas with morphological and molecular alterations comparable to human KRAS mutated serrated tumors. Thus, we suggest that oncogenic K-ras is sufficient to initiate an alternative, serrated pathway to colorectal cancer and hence propose RAS-RAF-MEK signaling apart from APC as an additional gatekeeper in colorectal tumor development.
 
Overall design 2 to 3 tissue samples for each genotype were analyzed
 
Contributor(s) Bennecke M, Greten FR
Citation(s) 20708155
Submission date Mar 05, 2010
Last update date Mar 04, 2019
Contact name Moritz Bennecke
Organization name Klinikum r.d.Isar
Department II. Med Klinik
Lab F.R. Greten
Street address Ismaninger Str. 22
City Muenchen
ZIP/Postal code 81675
Country Germany
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM518357 aom tumor viras 11259
GSM518358 aom tumor viras 12231
GSM518359 aom tumor viras 13939
Relations
BioProject PRJNA124871

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20647_RAW.tar 30.1 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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