 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 27, 2022 |
| Title |
RNA-seq analysis of human colorectal cancer cells with NAT10 deficiency. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Transcriptional analysis of DLD-1 and SW480 cells with NAT10 knockdown.
|
| |
|
| Overall design |
Comparative gene expression profiling analysis of RNA-seq data for DLD-1 and SW480 cells and its KD derivatives (shNAT10).
|
| |
|
| Contributor(s) |
Jin C, Wang T, Yang P, Zhang C, Peng W, Zhang D, Jin K, Wang L, Zhou J, Peng C, Tan Y, Ji J, Chen Z, Sun Q, Yang S, Tang J, Feng Y, Sun Y |
| Citation(s) |
36522719 |
| Submission date |
Aug 03, 2022 |
| Last update date |
Dec 28, 2022 |
| Contact name |
Chi Jin |
| E-mail(s) |
jinchi1997@stu.njmu.edu.cn
|
| Organization name |
Nanjing university school
|
| Street address |
Han Zhong Road
|
| City |
Nanjing |
| ZIP/Postal code |
210000 |
| Country |
China |
| |
|
| Platforms (1) |
|
| Samples (8)
|
| GSM6429527 |
DLD-1 cells, shControl, bio rep1 [NC1A_DLD] |
| GSM6429528 |
DLD-1 cells, shControl, bio rep2 [NC2A_DLD] |
| GSM6429529 |
DLD-1 cells, shNAT10, bio rep1 [SL1A_DLD] |
| GSM6429530 |
DLD-1 cells, shNAT10, bio rep2 [SL2A_DLD] |
| GSM6429531 |
SW480 cells, shControl, bio rep1 [NC1A_480] |
| GSM6429532 |
SW480 cells, shControl, bio rep2 [NC2A_480] |
| GSM6429533 |
SW480 cells, shNAT10, bio rep1 [SL1A_480] |
| GSM6429534 |
SW480 cells, shNAT10, bio rep2 [SL2A_480] |
|
| Relations |
| BioProject |
PRJNA865553 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE210384_RAW.tar |
7.8 Mb |
(http)(custom) |
TAR (of TXT) |
| GSE210384_Raw_gene_counts_matrix.txt.gz |
2.8 Mb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
| Processed data are available on Series record |
|
|
|
|
 |
Less...
More...