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Series GSE212619 Query DataSets for GSE212619
Status Public on Apr 15, 2023
Title p120 RasGAP and ZO-2 promote the tumor suppressor function of p190A RhoGAP
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary ARHGAP35 encoding p190A RhoGAP (p190A) was identified by GWAS as a major human cancer gene. Our published studies have determined that p190A is a tumor suppressor that activates the canonical Hippo pathway. To elucidate how p190A signals in this context, we performed mass spectrometry to identify p190A binding proteins. Two interactors were identified significantly more frequently than others: p120 RasGAP (p120) and ZO-1. Originally p190A was cloned via its direct binding to p120, hence validating our approach. In addition, we found that p190A also binds to ZO-2. The interaction of p190A with ZO-2 is dependent on p120, thus suggesting formation of a ternary complex. Next, we determine that both p120 and ZO-2, but not ZO-1, are necessary for p190A to activate LATS kinases and suppress tumorigenesis in a xenograft mouse model. Moreover, the interactions with p120 and ZO-2 are essential for transcriptional modulation by p190A, including the CDH1 gene encoding E-cadherin, which we previously have demonstrated is essential for p190A signaling. Collectively, this work identifies a novel tumor suppressor interactome of p190A, which includes ZO-2, an established constituent of the Hippo pathway, and p120, which in spite of its strong association with Ras signaling, is essential for p190A to activate LATS kinases.
 
Overall design H661 cells, which harbor defined ARHGAP35 loss-of-function alterations, were restored with wild-type p190A expression to generate H661-p190A cells. H661 cells were also restored with p190A mutant (Y1087F+Y1105F), we abbreviate this mutant p190A(Y2F). To generate H661-p190A cells with knockout of TJP1 and TJP2, H661-p190A cells were transduced with lentivirus encoding Cas9 and TJP1 or TJP2 sgRNA. Global transcriptomes were profiled by bulk RNA-Seq for H661-control cells, H661-p190A cells, H661-p190A(Y2F) cells, H661-p190A+TJP1-ko cells, H661-p190A+TJP2-ko cells. To investigate the H661 cell line specific Hippo pathway gene sets, we generated H661+p190A+LATS1/2-kd cells as well as H661+p190A as control, for which we have tested their function in our previous Oncogene 2020 paper (doi.org/10.1038/s41388-020-1385-2).
 
Contributor(s) Ouyang H, Hansen S
Citation(s) 37995182
Submission date Sep 02, 2022
Last update date Feb 09, 2024
Contact name Steen Hansen
E-mail(s) steen.hansen@childrens.harvard.edu
Phone 617-319-1176
Organization name Boston Children's Hospital
Department GI Division
Lab Steen Hansen's lab
Street address Enders Building, Room 1016
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL23227 BGISEQ-500 (Homo sapiens)
Samples (24)
GSM6541655 1_control_1
GSM6541656 2_control_2
GSM6541657 3_control_3
Relations
BioProject PRJNA876272

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Supplementary file Size Download File type/resource
GSE212619_all_counts_LATSkd.csv.gz 328.6 Kb (ftp)(http) CSV
GSE212619_counts_raw.csv.gz 550.0 Kb (ftp)(http) CSV
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