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Series GSE215053 Query DataSets for GSE215053
Status Public on May 17, 2023
Title Expression data from RAW264.7 cells infected with wild-type vs srfJ mutant Salmonella enterica serovar Typhimurium
Organism Mus musculus
Experiment type Expression profiling by array
Summary SrfJ is an effector of the type III secretion systems of the Gram-negative intracellular pathogen Salmonella enterica serovar Typhimurium.
To study the effects of this effector on global gene expression in host cells, we have infected murine RAW264.7 macrophages with two strains of Salmonella enterica serovar Typhimurium. The comparison between cells infected with the wild-type strain and cells infected with a srfJ mutant revealed a number of genes that are differentially expressed when SrfJ is present.
 
Overall design Two conditions. Each condition replicated three times. Condition 1: RAW264.7 macrophages infected with wild-type strain 14028 of Salmonella enterica serovar Typhimurium. Condition 2: RAW264.7 macrophages infected with srfJ null mutant strain of Salmonella enterica serovar Typhimurium.
 
Contributor(s) Bernal-Bayard J, Aguilera-Herce J, Balbontín R, Ramos-Morales F
Citation(s) 37176110
Submission date Oct 07, 2022
Last update date May 19, 2023
Contact name Francisco Ramos-Morales
E-mail(s) framos@us.es
Organization name Universidad de Sevilla
Department Genética
Street address Avda Reina Mercedes, 6
City Sevilla
State/province Sevilla
ZIP/Postal code 41012
Country Spain
 
Platforms (1)
GPL23038 [Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (6)
GSM6620581 RAW_infected_wt_rep1
GSM6620582 RAW_infected_wt_rep2
GSM6620583 RAW_infected_wt_rep3
Relations
BioProject PRJNA888127

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Supplementary file Size Download File type/resource
GSE215053_RAW.tar 7.3 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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