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Series GSE216826 Query DataSets for GSE216826
Status Public on May 15, 2024
Title The role of Matrin 3 (MATR3) in innate immune response to double-stranded RNAs (MinION RNA-Seq)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the role of Matrin 3 (MATR3) in the innate immune response we analyzed and compared MATR3 KO Clones versus Wild Type HAP1 cells.
 
Overall design Comparative gene expression profiling analysis of Oxford Nanopore long-read RNA-sequencing data between MATR3 KO versus Wild Type HAP1 cells.
 
Contributor(s) Islam Z, Chim B, Foroushani AK, Muljo S
Citation(s) 38712171
Submission date Oct 28, 2022
Last update date May 15, 2024
Contact name Stefan Muljo
E-mail(s) muljos@niaid.nih.gov
Organization name NIH, NIAID
Lab Laboratory of Immune System Biology
Street address 10 Center Drive
City Bethesda
State/province MD
ZIP/Postal code 20892-1892
Country USA
 
Platforms (1)
GPL24106 MinION (Homo sapiens)
Samples (4)
GSM6696293 HAP1 WT #4 rep1
GSM6696294 HAP1 WT #4 rep2
GSM6696295 MATR3 KO #1
This SubSeries is part of SuperSeries:
GSE216830 The role of Matrin 3 (MATR3) in innate immune response to double-stranded RNAs
Relations
BioProject PRJNA895453

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MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE216826_counts.and.DESeq.results.ONT.xlsx 3.7 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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