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Series GSE218115 Query DataSets for GSE218115
Status Public on Oct 20, 2023
Title SMARCB1 loss creates patient-specific MYC topologies that drive malignant rhabdoid tumor growth
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 38040699
Submission date Nov 16, 2022
Last update date Dec 14, 2023
Contact name Ning Qing Liu
E-mail(s) n.liu@erasmusmc.nl
Organization name Erasmus University Medical Center Rotterdam
Department Hematology
Street address Wytemaweg 80
City Rotterdam
ZIP/Postal code 3015 CN
Country Netherlands
 
Platforms (4)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
GPL21697 NextSeq 550 (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (67)
GSM6734756 4C.01_MRTK.60_MYC.P_CTRL_rep1
GSM6734757 4C.03_MRTK.60_MYC.P_SMARCB1_rep1
GSM6734758 4C.05_MRTK.78_MYC.P_CTRL_rep1
This SuperSeries is composed of the following SubSeries:
GSE218110 SMARCB1 loss creates patient-specific MYC topologies that drive malignant rhabdoid tumor growth [4C-seq]
GSE218111 SMARCB1 loss creates patient-specific MYC topologies that drive malignant rhabdoid tumor growth [ATAC-seq]
GSE218112 SMARCB1 loss creates patient-specific MYC topologies that drive malignant rhabdoid tumor growth [ChIP-seq]
Relations
BioProject PRJNA902395

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE218115_RAW.tar 6.8 Gb (http)(custom) TAR (of BEDGRAPH, BW, HIC)

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