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GEO help: Mouse over screen elements for information. |
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Status |
Public on Oct 03, 2023 |
Title |
Epigenetic dynamics during capacitation of naïve human pluripotent stem cells |
Organism |
Homo sapiens |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
37774033 |
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Submission date |
Nov 21, 2022 |
Last update date |
Oct 04, 2023 |
Contact name |
Laura Biggins |
E-mail(s) |
laura.biggins@babraham.ac.uk
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Organization name |
The Babraham Institute
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Department |
Bioinformatics
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Street address |
Babraham Research Campus
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City |
Cambridge |
ZIP/Postal code |
CB22 3AT |
Country |
United Kingdom |
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Platforms (2) |
GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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Samples (122)
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GSM6749119 |
HNES1_d0_rep_2, D0A-2 |
GSM6749120 |
cR_H9_EOS_d0_rep_1, W0A-1 |
GSM6749121 |
cR_H9_EOS_d0_rep_1, W0A-2 |
GSM6749122 |
cR_H9_EOS_d0_rep_2, Z0A-1 |
GSM6749123 |
cR_H9_EOS_d0_rep_2, Z0A-2 |
GSM6749124 |
HNES1_d10_rep_1, C10A-1 |
GSM6749125 |
HNES1_d10_rep_1, C10A-2 |
GSM6749126 |
HNES1_d10_rep_2, D10A-1 |
GSM6749127 |
HNES1_d10_rep_2, D10A-2 |
GSM6749128 |
cR_H9_EOS_d10_rep_1, W10A-1 |
GSM6749129 |
cR_H9_EOS_d10_rep_1, W10A-2 |
GSM6749130 |
cR_H9_EOS_d10_rep_2, Z10A-1 |
GSM6749131 |
cR_H9_EOS_d10_rep_2, Z10A-2 |
GSM6749132 |
cR_H9_EOS_d20E_rep_1, W27E-1 |
GSM6749133 |
cR_H9_EOS_d20E_rep_1, W27E-2 |
GSM6749134 |
cR_H9_EOS_d20E_rep_2, Z23E_-1 |
GSM6749135 |
cR_H9_EOS_d20E_rep_2, Z23E_-2 |
GSM6749136 |
cR_H9_EOS_d20X_rep_1, W28X-1 |
GSM6749137 |
cR_H9_EOS_d20X_rep_1, W28X-2 |
GSM6749138 |
cR_H9_EOS_d20X_rep_2, Z23X-1 |
GSM6749139 |
cR_H9_EOS_d20X_rep_2, Z23X-2 |
GSM6749140 |
H9_EOS_rep_1, H9-1-A |
GSM6749141 |
H9_EOS_rep_1, H9-3-A |
GSM6749142 |
H9_EOS_rep_2, H9-4_1 |
GSM6749143 |
H9_EOS_rep_2, H9-4_2 |
GSM6749144 |
cR_H9_EOS_d0_rep1, H3K4me1 |
GSM6749145 |
cR_H9_EOS_d0_rep2, H3K4me1 |
GSM6749146 |
HNES1_d0_rep1, H3K4me1 |
GSM6749147 |
HNES1_d0_rep2, H3K4me1 |
GSM6749148 |
cR_H9_EOS_d10_rep1, H3K4me1 |
GSM6749149 |
cR_H9_EOS_d10_rep2, H3K4me1 |
GSM6749150 |
HNES1_d10_rep1, H3K4me1 |
GSM6749151 |
HNES1_d10_rep2, H3K4me1 |
GSM6749152 |
cR_H9_EOS_d20E_rep1, H3K4me1 |
GSM6749153 |
cR_H9_EOS_d20E_rep2, H3K4me1 |
GSM6749154 |
cR_H9_EOS_d20X_rep1, H3K4me1 |
GSM6749155 |
cR_H9_EOS_d20X_rep2, H3K4me1 |
GSM6749156 |
H9_EOS_rep1, H3K4me1 |
GSM6749157 |
H9_EOS_rep2, H3K4me1 |
GSM6749158 |
cR_H9_EOS_d0_rep1, H3K4me3 |
GSM6749159 |
cR_H9_EOS_d0_rep2, H3K4me3 |
GSM6749160 |
cR_H9_EOS_d10_rep1, H3K4me3 |
GSM6749161 |
cR_H9_EOS_d10_rep2, H3K4me3 |
GSM6749162 |
cR_H9_EOS_d20E_rep1, H3K4me3 |
GSM6749163 |
cR_H9_EOS_d20E_rep2, H3K4me3 |
GSM6749164 |
cR_H9_EOS_d20X_rep1, H3K4me3 |
GSM6749165 |
cR_H9_EOS_d20X_rep2, H3K4me3 |
GSM6749166 |
H9_EOS_rep1, H3K4me3 |
GSM6749167 |
H9_EOS_rep2, H3K4me3 |
GSM6749168 |
HNES1_d0_rep1, H3K4me3 |
GSM6749169 |
HNES1_d0_rep2, H3K4me3 |
GSM6749170 |
HNES1_d10_rep1, H3K4me3 |
GSM6749171 |
HNES1_d10_rep2, H3K4me3 |
GSM6749172 |
cR_H9_EOS_d0_rep1, H3K9me3 |
GSM6749173 |
cR_H9_EOS_d0_rep2, H3K9me3 |
GSM6749174 |
cR_H9_EOS_d10_rep1, H3K9me3 |
GSM6749175 |
cR_H9_EOS_d10_rep2, H3K9me3 |
GSM6749176 |
cR_H9_EOS_d20E_rep1, H3K9me3 |
GSM6749177 |
cR_H9_EOS_d20E_rep2, H3K9me3 |
GSM6749178 |
cR_H9_EOS_d20X_rep1, H3K9me3 |
GSM6749179 |
cR_H9_EOS_d20X_rep2, H3K9me3 |
GSM6749180 |
H9_EOS_rep1, H3K9me3 |
GSM6749181 |
H9_EOS_rep2, H3K9me3 |
GSM6749182 |
HNES1_d0_rep1, H3K9me3 |
GSM6749183 |
HNES1_d0_rep2, H3K9me3 |
GSM6749184 |
HNES1_d10_rep1, H3K9me3 |
GSM6749185 |
HNES1_d10_rep2, H3K9me3 |
GSM6749186 |
cR_H9_EOS_d0_rep1, H3K27ac |
GSM6749187 |
cR_H9_EOS_d0_rep2, H3K27ac |
GSM6749188 |
cR_H9_EOS_d10_rep1, H3K27ac |
GSM6749189 |
cR_H9_EOS_d10_rep2, H3K27ac |
GSM6749190 |
cR_H9_EOS_d20E_rep1, H3K27ac |
GSM6749191 |
cR_H9_EOS_d20E_rep2, H3K27ac |
GSM6749192 |
cR_H9_EOS_d20X_rep1, H3K27ac |
GSM6749193 |
cR_H9_EOS_d20X_rep2, H3K27ac |
GSM6749194 |
H9_EOS_rep2, H3K27ac |
GSM6749195 |
H9_EOS_rep1, H3K27ac |
GSM6749196 |
HNES1_d0_rep1, H3K27ac |
GSM6749197 |
HNES1_d0_rep2, H3K27ac |
GSM6749198 |
HNES1_d10_rep1, H3K27ac |
GSM6749199 |
HNES1_d10_rep2, H3K27ac |
GSM6749200 |
cR_H9_EOS_d0_rep1, H3K27me3 |
GSM6749201 |
cR_H9_EOS_d0_rep2, H3K27me3 |
GSM6749202 |
cR_H9_EOS_d10_rep1, H3K27me3 |
GSM6749203 |
cR_H9_EOS_d10_rep2, H3K27me3 |
GSM6749204 |
cR_H9_EOS_d20E_rep1, H3K27me3 |
GSM6749205 |
cR_H9_EOS_d20E_rep2, H3K27me3 |
GSM6749206 |
cR_H9_EOS_d20X_rep1, H3K27me3 |
GSM6749207 |
cR_H9_EOS_d20X_rep2, H3K27me3 |
GSM6749208 |
H9_EOS_rep1, H3K27me3 |
GSM6749209 |
H9_EOS_rep2, H3K27me3 |
GSM6749210 |
HNES1_d0_rep1, H3K27me3 |
GSM6749211 |
HNES1_d0_rep2, H3K27me3 |
GSM6749212 |
HNES1_d10_rep1, H3K27me3 |
GSM6749213 |
HNES1_d10_rep2, H3K27me3 |
GSM6749214 |
cR_H9_EOS_d0_rep3 |
GSM6749215 |
cR_H9_EOS_d0_rep4 |
GSM6749216 |
cR_H9_EOS_d0_rep2 |
GSM6749217 |
HNES1_d0_rep1 |
GSM6749218 |
HNES1_d0_rep3 |
GSM6749219 |
HNES1_d0_rep2 |
GSM6749220 |
HNES1_d0_rep4 |
GSM6749221 |
cR_H9_EOS_d10_rep3 |
GSM6749222 |
cR_H9_EOS_d10_rep2 |
GSM6749223 |
cR_H9_EOS_d10_rep4 |
GSM6749224 |
cR_H9_EOS_d10_rep1 |
GSM6749225 |
HNES1_d10_rep3 |
GSM6749226 |
HNES1_d10_rep2 |
GSM6749227 |
HNES1_d10_rep1 |
GSM6749228 |
HNES1_d10_rep4 |
GSM6749229 |
cR_H9_EOS_d20E_rep3 |
GSM6749230 |
cR_H9_EOS_d20E_rep1 |
GSM6749231 |
cR_H9_EOS_d20X_rep1 |
GSM6749232 |
cR_H9_EOS_d20X_rep3 |
GSM6749233 |
cR_H9_EOS_d20X_rep2 |
GSM6749234 |
H9_EOS_rep2 |
GSM6749235 |
H9_EOS_rep4 |
GSM6749236 |
H9_EOS_rep1 |
GSM6749237 |
H9_EOS_rep3 |
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This SuperSeries is composed of the following SubSeries: |
GSE218509 |
Epigenetic dynamics during capacitation of naïve human pluripotent stem cells [ATAC-seq] |
GSE218510 |
Epigenetic dynamics during capacitation of naïve human pluripotent stem cells [ChIP-seq] |
GSE218511 |
Epigenetic dynamics during capacitation of naïve human pluripotent stem cells [PBAT] |
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Relations |
BioProject |
PRJNA904043 |
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