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GEO help: Mouse over screen elements for information. |
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Status |
Public on May 19, 2023 |
Title |
Mapping disease-associated regulatory circuits by cell type from single-cell multiomics data |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Web link |
https://doi.org/10.1038/s43588-023-00476-5
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Citation(s) |
37974651 |
Submission date |
Dec 06, 2022 |
Last update date |
Dec 07, 2023 |
Contact name |
Elena Zaslavsky |
E-mail(s) |
elena.zaslavsky@mssm.edu
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Organization name |
Icahn School of Medicine at Mount Sinai
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Street address |
1 Gustave L. Levy Pl
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City |
New York |
State/province |
NY |
ZIP/Postal code |
10029 |
Country |
USA |
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Platforms (2) |
GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
GPL30173 |
NextSeq 2000 (Homo sapiens) |
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Samples (97)
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GSM6793420 |
AS11-07049, Control, scATACseq |
GSM6793421 |
AS11-07881, Control, scATACseq |
GSM6793422 |
AS11-12162, Control, scATACseq |
GSM6793423 |
AS11-18755, Control, scATACseq |
GSM6793424 |
AS13-13951, Control, scATACseq |
GSM6793425 |
AS13-08590, Control, scATACseq |
GSM6793426 |
AS14-00902, Control, scATACseq |
GSM6793427 |
AS14-03700, Control, scATACseq |
GSM6793428 |
AS17-00144, Control, scATACseq |
GSM6793429 |
AS17-02129, Control, scATACseq |
GSM6793430 |
AS18-00669, Control, scATACseq |
GSM6793431 |
BMI0037, Control, scATACseq |
GSM6793432 |
BMI0040, Control, scATACseq |
GSM6793433 |
BMI0093, Control, scATACseq |
GSM6793434 |
BMI0094, Control, scATACseq |
GSM6793435 |
BMI0095, Control, scATACseq |
GSM6793436 |
BMI0099, Control, scATACseq |
GSM6793437 |
BMI0101, Control, scATACseq |
GSM6793438 |
BMI0102, Control, scATACseq |
GSM6793439 |
BWJ0023, Control, scATACseq |
GSM6793440 |
DU19-01S0003453, MSSA, scATACseq |
GSM6793441 |
DU19-01S0003462, MSSA, scATACseq |
GSM6793442 |
DU19-01S0003464, MSSA, scATACseq |
GSM6793443 |
DU19-01S0003466, MSSA, scATACseq |
GSM6793444 |
DU19-01S0003482, MSSA, scATACseq |
GSM6793445 |
DU19-01S0003492, MSSA, scATACseq |
GSM6793446 |
DU19-01S0003507, MSSA, scATACseq |
GSM6793447 |
DU19-01S0003509, MSSA, scATACseq |
GSM6793448 |
DU19-01S0003515, MSSA, scATACseq |
GSM6793449 |
DU19-01S0003527, MSSA, scATACseq |
GSM6793450 |
DU19-01S0003542, MRSA, scATACseq |
GSM6793451 |
DU19-01S0003549, MRSA, scATACseq |
GSM6793452 |
DU19-01S0003978, MRSA, scATACseq |
GSM6793453 |
DU19-01S0003987, MRSA, scATACseq |
GSM6793454 |
DU19-01S0003989, MRSA, scATACseq |
GSM6793455 |
DU19-01S0003992, MRSA, scATACseq |
GSM6793456 |
DU19-01S0003994, MRSA, scATACseq |
GSM6793457 |
DU19-01S0004011, MRSA, scATACseq |
GSM6793458 |
DU19-01S0004013, MRSA, scATACseq |
GSM6793459 |
DU19-01S0004015, MRSA, scATACseq |
GSM6793460 |
DU19-01S0004017, MSSA, scATACseq |
GSM6793461 |
AS08-09890, Control, scRNAseq |
GSM6793462 |
AS09-13278, Control, scRNAseq |
GSM6793463 |
AS10-21035, Control, scRNAseq |
GSM6793464 |
AS11-07049, Control, scRNAseq |
GSM6793465 |
AS11-07881, Control, scRNAseq |
GSM6793466 |
AS11-12162, Control, scRNAseq |
GSM6793467 |
AS11-18755, Control, scRNAseq |
GSM6793468 |
AS13-13951, Control, scRNAseq |
GSM6793469 |
AS13-08590, Control, scRNAseq |
GSM6793470 |
AS14-00902, Control, scRNAseq |
GSM6793471 |
AS14-03700, Control, scRNAseq |
GSM6793472 |
AS17-00144, Control, scRNAseq |
GSM6793473 |
AS17-02129, Control, scRNAseq |
GSM6793474 |
AS18-00669, Control, scRNAseq |
GSM6793475 |
BMI0037, Control, scRNAseq |
GSM6793476 |
BMI0040, Control, scRNAseq |
GSM6793477 |
BMI0093, Control, scRNAseq |
GSM6793478 |
BMI0094, Control, scRNAseq |
GSM6793479 |
BMI0095, Control, scRNAseq |
GSM6793480 |
BMI0099, Control, scRNAseq |
GSM6793481 |
BMI0101, Control, scRNAseq |
GSM6793482 |
BMI0102, Control, scRNAseq |
GSM6793483 |
BWJ0023, Control, scRNAseq |
GSM6793484 |
DU19-01S0003453, MSSA, scRNAseq |
GSM6793485 |
DU19-01S0003462, MSSA, scRNAseq |
GSM6793486 |
DU19-01S0003464, MSSA, scRNAseq |
GSM6793487 |
DU19-01S0003466, MSSA, scRNAseq |
GSM6793488 |
DU19-01S0003482, MSSA, scRNAseq |
GSM6793489 |
DU19-01S0003492, MSSA, scRNAseq |
GSM6793490 |
DU19-01S0003507, MSSA, scRNAseq |
GSM6793491 |
DU19-01S0003509, MSSA, scRNAseq |
GSM6793492 |
DU19-01S0003515, MSSA, scRNAseq |
GSM6793493 |
DU19-01S0003527, MSSA, scRNAseq |
GSM6793494 |
DU19-01S0003542, MRSA, scRNAseq |
GSM6793495 |
DU19-01S0003549, MRSA, scRNAseq |
GSM6793496 |
DU19-01S0003978, MRSA, scRNAseq |
GSM6793497 |
DU19-01S0003987, MRSA, scRNAseq |
GSM6793498 |
DU19-01S0003989, MRSA, scRNAseq |
GSM6793499 |
DU19-01S0003992, MRSA, scRNAseq |
GSM6793500 |
DU19-01S0003994, MRSA, scRNAseq |
GSM6793501 |
DU19-01S0004011, MRSA, scRNAseq |
GSM6793502 |
DU19-01S0004013, MRSA, scRNAseq |
GSM6793503 |
DU19-01S0004015, MRSA, scRNAseq |
GSM6793504 |
DU19-01S0004017, MSSA, scRNAseq |
GSM6925808 |
20_1855-T49-PBM_7, SARS-CoV-2, snATACseq |
GSM6925809 |
20_2266-T32-PBM_7, SARS-CoV-2, snATACseq |
GSM6925810 |
20_2528-T42-PBM_7, SARS-CoV-2, snATACseq |
GSM6925811 |
20_2557-T32-PBM_7, SARS-CoV-2, snATACseq |
GSM6925812 |
20_2624-T32-PBM_7, SARS-CoV-2, snATACseq |
GSM6925813 |
20_2654-T35-PBM_7, SARS-CoV-2, snATACseq |
GSM6925814 |
20_2773-T00-PBM_7, Control, snATACseq |
GSM6925815 |
20_2800-T00-PBM_7, Control, snATACseq |
GSM6925816 |
20_3000-T00-PBM_7, Control, snATACseq |
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This SuperSeries is composed of the following SubSeries: |
GSE220188 |
Mapping disease-associated regulatory circuits by cell type from single-cell multiomics data (S. aureus scATAC-seq) |
GSE220189 |
Mapping disease-associated regulatory circuits by cell type from single-cell multiomics data (S. aureus scRNA-seq) |
GSE222548 |
Mapping disease-associated regulatory circuits by cell type from single-cell multiomics data (COVID-19 scATAC-seq) |
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Relations |
BioProject |
PRJNA909215 |
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