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Series GSE22268 Query DataSets for GSE22268
Status Public on Jun 15, 2010
Title ChIP-Seq of H3K79me2 in Mouse Embryonic Fibroblasts
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary H3K79 dimethylation is a mark of transcriptional elongation.  To gain insight into the set of genes actively transcribed in MEFs, chromatin immunoprecipitation coupled with massive parallel sequencing (ChIP-seq) was performed to determine the presence of H3K79me2 across the genome.
 
Overall design DNA was enriched by chromatin immunoprecipitation (ChIP) and analyzed by Solexa sequencing. ChIP was performed using an antibody against H3K79me2.
 
Contributor(s) Bilodeau S, Young RA
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Submission date Jun 10, 2010
Last update date May 15, 2019
Contact name Richard A Young
E-mail(s) young_computation@wi.mit.edu
Phone 617-258-5219
Organization name Whitehead Institute for Biomedical Research
Lab Young Lab
Street address 9 Cambridge Center
City Cambridge
State/province MA
ZIP/Postal code 02142
Country USA
 
Platforms (1)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
Samples (2)
GSM555114 ChIP-Seq for H3K79me2 in MEF (B7)
GSM555115 ChIP-Seq for H3K79me2 in MEF (B6)
Relations
SRA SRP002624
BioProject PRJNA128747

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22268_RAW.tar 100.7 Mb (http)(custom) TAR (of TXT, WIG)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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