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Series GSE222883 Query DataSets for GSE222883
Status Public on May 31, 2023
Title Periodontitis-induced inflammation: impacts of hyperglycemic microenvironment
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Dysbiosis of subgingival microbiome promotes the growth of periodontopathogens and the development of periodontitis, an irreversible chronic inflammatory disease. Untreated periodontitis leads to the destruction of connective tissues, alveolar bone resorption and ultimately to tooth loss. Periodontitis has been associated with inflammatory metabolic diseases such as type 2 diabetes. While periodontitis-induced inflammation is a key player in both, the development of subgingival microbiome dysbiosis and in the host-microbiome interaction, the effects of hyperglycemia on the regulation of the host genes controlling the inflammatory response and the host-microbiome interaction are still scarce. We investigated the impacts of a hyperglycemic microenvironment on the inflammatory response and gene expression of a gingival fibroblasts-macrophages coculture model stimulated with dysbiotic subgingival microbiomes. A coculture model composed of immortalized human gingival fibroblasts overlaid with U937 macrophages-likes cells were stimulated with subgingival microbiome collected from four healthy donors and four patients with periodontitis. Pro-inflammatory cytokines and matrix metalloproteinase were measured by a Luminex assay while the coculture RNA was submitted to a microarray analysis. Subgingival microbiomes were submitted to 16s rRNA gene sequencing. Data were analyzed by using an advanced multi-omics bioinformatic data integration model. Our results showed that krt76, krt27, pnma5, mansc4, rab41, thoc6, tm6sf2, and znf506 as well as the pro-inflammatory cytokines IL-1, GM-CSF, FGF2, IL-10, the metalloproteinases MMP3 and MMP8, and bacteria from the ASV 105, ASV 211, ASV 299, Prevotella, Campylobacter and Fretibacterium genera are key correlated variables contributing to periodontitis-induced inflammatory response in a hyperglycemic microenvironment. To conclude, our multi-omics integration analysis unveiled unique differentially interrelated bacterial genera, genes and pro-inflammatory cytokines involved in the regulation of the inflammatory response in a hyperglycemic microenvironment. These data also highlight the importance of considering hyperglycemic conditions in the development of new drugs or treatments for periodontal disease in link with type 2 diabetes.
 
Overall design 4 samples with periodontitis co-cultured with low glucose level, 4 samples with periodontitis co-cultured with high glucose level, 4 healthy samples co-cultured with low glucose level, 4 healthy samples co-cultured with high glucose level, 2 negative control samples.
 
Contributor(s) Lafleur S, Bodein A, Malaïka Mutombo JM, Mathieu A, Beauparlant CJ, Minne X, Chandad F, Droit A, Houde VP
Citation(s) 37240180
Submission date Jan 13, 2023
Last update date Jun 01, 2023
Contact name Antoine BODEIN
E-mail(s) antoine.bodein@crchudequebec.ulaval.ca
Organization name Université Laval
Street address 2705 bd Laurier
City Québec
State/province QC
ZIP/Postal code G1V4G2
Country Canada
 
Platforms (1)
GPL23159 [Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay)
Samples (18)
GSM6934496 Bio4_Healthy_Low
GSM6934497 Bio3_Perio_Low
GSM6934498 Bio4_Healthy_High
Relations
BioProject PRJNA923697

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE222883_RAW.tar 22.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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