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Series GSE227380 Query DataSets for GSE227380
Status Public on Dec 01, 2023
Title CD146 accelerates malignant progression of phyllodes tumor cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Breast malignant phyllodes tumors (PTs) are rapid-progressing tumors, known to lack effective treatment and suitable prognostic markers as well as elaborate studies. Herein,we found that level of CD146 is progressively elevated with malignant progression of PTs and is an independent predictor for prognosis of PT patients.Mechanistically, CD146 activates the PI3K/AKT signaling pathway, thereby enhancing malignant behaviors of PT cells.This study unveils a CD146-PI3K/AKT axis in modulating the malignant progression of PTs, and open avenues to develop a novel target for precise prognosis and treatment for breast malignant PTs.
 
Overall design Total RNA in the cells from different treatment group (benign PT cell B1 or CD146 overexpression cell B2; malignant PT cell M1 or CD146 silencing cell M2 ) was obtained by Trizol. Transcriptome sequencing was applied to analyze the expression profiling of human transcripts in the samples and performed by BGI Technology lnc (Shenzhen, China). The raw data were extracted by Feature Extraction software and further quantile normalized.
 
Contributor(s) Yan N, Chen J, Xu Q
Citation(s) 37856423
Submission date Mar 15, 2023
Last update date Dec 01, 2023
Contact name Nie Yan
E-mail(s) nieyan7@mail.sysu.edu.cn
Organization name Sun Yat-sen University
Department Sun Yat-sen Memorial Hospital,
Lab Breast Tumor Center
Street address 107 Yangxi Road, Yuexiu District,
City Guangzhou
State/province Guangdong
ZIP/Postal code 510120
Country China
 
Platforms (1)
GPL30209 MGISEQ-2000RS (Homo sapiens)
Samples (4)
GSM7099588 SYSH-BPT-01 cells, Control [B1]
GSM7099589 SYSH-BPT-01 cells, CD146OE [B2]
GSM7099590 SYSH-MPT-01 cells, Control [M1]
Relations
BioProject PRJNA944931

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Supplementary file Size Download File type/resource
GSE227380_RAW.tar 9.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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