|
| Status |
Public on Jul 13, 2010 |
| Title |
SplicePL: de novo splice junction detection from paired-end RNA-seq reads |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We generate this 130-nt dataset to benchmark SplicePL, TopHat and SpliceMap.
|
| |
|
| Overall design |
Retina sample from one human donor.
|
| |
|
| Contributor(s) |
Tian L, Stambolian D |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Jul 06, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Lifeng Tian |
| E-mail(s) |
lifeng2@mail.med.upenn.edu
|
| Organization name |
University of Pennsylvania
|
| Street address |
422 Curie Bldv
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL9052 |
Illumina Genome Analyzer (Homo sapiens) |
|
| Samples (1) |
|
| Relations |
| SRA |
SRP002881 |
| BioProject |
PRJNA128253 |
