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Series GSE228086 Query DataSets for GSE228086
Status Public on Mar 20, 2024
Title Hepatic Stellate Cell Activation after 72hr
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Chronic liver diseases as non-alcoholic steatohepatitis (NASH)-induced cirrhosis are characterized by an increasing accumulation of stressed, damaged, or dying hepatocytes. Hepatocyte damage triggers the activation of resident immune cells, such as Kupffer cells (KC), as well as the recruitment of immune cells from the circulation towards areas of inflammation. After infiltration, monocytes differentiate into monocyte-derived macrophages (MoMF) which are functionally distinct from resident KC. We herein aim to compare in vitro signatures of polarized macrophages and activated hepatic stellate cells (HSC) with ex vivo derived disease signatures from human NASH. Secondly, we investigate the effects of the secretome of primary human monocytes, macrophages and NK cells on HSC activation, as in particular monocytes and macrophages have often been linked to liver fibrosis progression. IL-4 and IL-13 treatment induced TGF-β1 secretion by macrophages. However, the supernatant transfer did not induce HSC activation. Interestingly, PMA-activated macrophages showed a strong induction of the fibrosis response genes COL10A1 and CTGF, while supernatant of IL-4/IL-13 treated monocytes induced the upregulation of COL3A1 in HSC. Supernatant of PMA-activated NK cells had the strongest effect on COL10A1 induction in HSC, while IL-15 stimulated NK cells reduced the expression of COL1A1 and CTGF. These data indicate that other factors, aside the well-known cytokines and chemokines, are potentially stronger contributors to activation of HSCs and induction of a fibrotic response, indicating a more diverse and complex role of monocytes, macrophages and NK cells in liver fibrosis progression.
 
Overall design Primary human hepatic stellate cells were treated with supernatant from macrophages stimulated with either IL4+IL13, TNFA or TGFB1 for 72 hours and then processed for RNASequencing.
 
Contributor(s) Sauer J, Steixner-Kumar AA, Bahrami E, Motyka M, Rippmann JF, Simon E, Krenkel O
Citation(s) 38638443
Submission date Mar 23, 2023
Last update date May 01, 2024
Contact name Eric Simon
E-mail(s) eric.simon@boehringer-ingelheim.com
Organization name Boehringer Ingelheim Pharma GmbH & Co KG
Street address Birkendorfer Str. 65
City Biberach a.d. Riss
ZIP/Postal code 88397
Country Germany
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (12)
GSM7113691 1_Hepatic_Stellate_Cell_Control_72h
GSM7113692 2_Hepatic_Stellate_Cell_Control_72h
GSM7113693 3_Hepatic_Stellate_Cell_Control_72h
This SubSeries is part of SuperSeries:
GSE228088 RNA-seq of Monocyte-derived Macrophages and Hepatic Stellate Cell Activation after 72hr
Relations
BioProject PRJNA948023

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE228086_HSC_counts.csv.gz 589.3 Kb (ftp)(http) CSV
GSE228086_HSC_tpm.csv.gz 779.2 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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