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| Status |
Public on Aug 09, 2023 |
| Title |
Transcriptomics and proteomics analyses reveal the anti-cancer properties of extract from Hypnea musciformis macroalgea in liver and intestinal cancer cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
To investigate the molecular effect of Hypnea musciformis macroalgea extract on HepG2 and Ls174 cancer cell lines we isolated total RNA from cultured cells with and without the extract after 24 hr incubation
We then performed gene expression profiling analysis performed in biological triplicates using data obtained from 3’ RNA-seq of 2 different cells with and without the extract at the IC50 concentration
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| Overall design |
Comparative gene expression profiling analysis of RNA-seq data for HepG2 and Ls174 cells with and without the microalgea extract
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| Contributor(s) |
Giakountis A, Stagkos D |
| Citation(s) |
37525271 |
| Submission date |
Mar 30, 2023 |
| Last update date |
Aug 10, 2023 |
| Contact name |
Antonis Giakountis |
| Organization name |
University of Thessaly
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| Department |
Biochemistry and Biotechnology
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| Street address |
Biopolis-Mezourlo
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| City |
Larissa |
| ZIP/Postal code |
41500 |
| Country |
Greece |
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| Platforms (1) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA950385 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE228578_RAW.tar |
28.2 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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