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Series GSE230669 Query DataSets for GSE230669
Status Public on Mar 06, 2024
Title Endocardial cells function as antigen-presenting cells to promote zebrafish heart regeneration
Organism Danio rerio
Experiment type Expression profiling by high throughput sequencing
Summary In contrast to adult mammals, adult zebrafish are able to fully regenerate injured cardiac tissue, and this regeneration process requires an adequate and tightly controlled immune response. However, which immune aspects drive particular aspects of the regenerative response are unclear. Here, we report the participation and requirement of the antigen presentation-adaptive immunity axis during zebrafish cardiac regeneration. We found that, in addition to immune cells, endocardial cells start expressing antigen presentation genes following the initial innate immune response. Consistent with this finding, we observed that helper T cells, a.k.a. Cd4+ T cells, are closely associated with phosphoERK+ (pERK+) (i.e., activated) endocardial cells at these stages. We inactivated major histocompatibility complex (MHC) class II antigen presentation by generating cd74a; cd74b double mutants, which display a defective immune response. In these mutants, both Cd4+ T cells and pERK+ endocardial cells fail to efficiently infiltrate the injured tissue. Notably, this model of compromised antigen presentation exhibits additional defects in cardiac regeneration including reduced cardiomyocyte dedifferentiation and proliferation. Altogether, these findings reveal a necessary role for antigen presentation during zebrafish cardiac regeneration and point to an immune crosstalk between T cells and endocardial cells, thereby further establishing a link between the adaptive immune response and tissue regeneration.
 
Overall design Comparative gene expression analysis between wild-type zebrafish cryoinjured ventricles (7 days post-cryoinjury) and cd74a;cd74b mutant ventricles (duplicates).
 
Contributor(s) Cardeira-da-Silva J, Wang Q, Latting S, Günther S, Sagvekar P, Ramadass R, Yekelchyk M, Mintcheva J, Preussner J, Looso M, Junker JP
Citation(s) 38684665
Submission date Apr 26, 2023
Last update date May 24, 2024
Contact name Stefan Günther
E-mail(s) stefan.guenther@mpi-bn.mpg.de
Organization name MPI for heart and lung research
Street address ludwigtr. 43
City bad nauheim
ZIP/Postal code 61231
Country Germany
 
Platforms (1)
GPL30614 NextSeq 2000 (Danio rerio)
Samples (4)
GSM7230939 WT1_biol_rep1
GSM7230940 WT2_biol_rep2
GSM7230941 Mut_biol_rep1
Relations
BioProject PRJNA962109

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Supplementary file Size Download File type/resource
GSE230669_counts.matrix.norm_anno.txt.gz 4.2 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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