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Series GSE23109 Query DataSets for GSE23109
Status Public on Jan 18, 2011
Title Genome-wide analysis of RNAs associated with Lin28
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We used immunoprecipitation to pulldown Lin28 associated RNA targets and used genome-wide high throughput deep sequencing to identified those Lin28-associated RNAs.
Keywords: Lin28 IP-RNAseq
 
Overall design Examination of Lin28 immunoprecipitated RNA transcripts
 
Contributor(s) Chen L, Yang L, Carmichael GG, Huang Y
Citation(s) 21425412
Submission date Jul 23, 2010
Last update date May 15, 2019
Contact name Ling-Ling Chen
E-mail(s) linglingchen@sibcb.ac.cn
Organization name Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
Street address 320 Yue-Yang Road
City Shanghai
ZIP/Postal code 200031
Country China
 
Platforms (1)
GPL9115 Illumina Genome Analyzer II (Homo sapiens)
Samples (2)
GSM569411 preimmune_seq
GSM569412 Lin28 IP_seq
Relations
SRA SRP003021
BioProject PRJNA131493

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23109_RAW.tar 45.9 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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